RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ACTL7AQ9Y615 435 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 AP2A1O95782 977 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
USP46-202ENST00000451218 GEMIN4P57678 1058 aaKnown RBP6.76□□□□□ -1.33
USP46-202ENST00000451218 TMC8Q8IU68 726 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 SLC39A11Q8N1S5 342 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 UMODL1-AS1Q8N2C9 162 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 COLGALT1Q8NBJ5 622 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 TEKT5Q96M29 485 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 C1QTNF1Q9BXJ1 281 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 ABCC13Q9NSE7 274 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 RRN3Q9NYV6 651 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 KCNK1O00180 336 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SMAPO00193 183 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 EEF2KO00418 725 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 SIN3BO75182 1162 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 HLA-DQB2P05538 268 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 DNAJB1P25685 340 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 HOXD9P28356 352 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 CCL23P55773 120 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 CAMK1Q14012 370 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 GLB1LQ6UWU2 654 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TIFABQ6ZNK6 161 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SRLQ86TD4 932 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 NUP93Q8N1F7 819 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 ARRDC2Q8TBH0 407 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 MRGPRX2Q96LB1 330 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TTC25Q96NG3 672 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TREX1Q9NSU2 369 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TMEM248Q9NWD8 314 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 DNMT3BQ9UBC3 853 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 SLC12A4Q9UP95 1085 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SLC27A5Q9Y2P5 690 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 PRG3Q9Y2Y8 225 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 GMNCA6NCL1 334 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 RPL17P18621 184 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 OR1G1P47890 313 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 GJA8P48165 433 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 HTRA4P83105 476 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 DSG1Q02413 1049 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TLE2Q04725 743 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 LRRC14Q15048 493 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 BRMS1LQ5PSV4 323 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 MARK2Q7KZI7 788 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 GSTA5Q7RTV2 222 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SIX6OS1Q8N1H7 587 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 PDCD7Q8N8D1 485 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 RMDN2Q96LZ7 410 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TRIB3Q96RU7 358 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 MED10Q9BTT4 135 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 ZNF334Q9HCZ1 680 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 CLIC5Q9NZA1 410 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TBK1Q9UHD2 729 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 BACE2Q9Y5Z0 518 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 GOLGA6L7A0A1B0GV03 622 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SMIM23A6NLE4 172 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 PQBP1O60828 265 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 GJB5O95377 273 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 ATXN1LP0C7T5 689 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 WDR5P61964 334 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 BASP1P80723 227 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 SPARCL1Q14515 664 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 Q6ZNB5 142 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 CENPUQ71F23 418 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 YTHDF3Q7Z739 585 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 CDKL3Q8IVW4 592 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 CNTN4Q8IWV2 1026 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 FAM149B1Q96BN6 582 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 SLC22A12Q96S37 553 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 NCAPGQ9BPX3 1015 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TSPYL1Q9H0U9 437 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 HIPK3Q9H422 1215 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP46-202ENST00000451218 MPP6Q9NZW5 540 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 OR51B4Q9Y5P0 310 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 TARM1B6A8C7 271 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 F5H423 210 aaPredicted RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 KIAA0355O15063 1070 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 CREB3O43889 395 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 OPHN1O60890 802 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 APOEP02649 317 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 ARL4CP56559 192 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 CRYMQ14894 314 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 FAM171A1Q5VUB5 890 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 RTL3Q8N8U3 475 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 BCAS4Q8TDM0 211 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 ALG14Q96F25 216 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 CNOT10Q9H9A5 744 aaKnown RBP6.75□□□□□ -1.33
USP46-202ENST00000451218 LRRC4Q9HBW1 653 aa6.75□□□□□ -1.33
USP46-202ENST00000451218 J3KR12 359 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 RGS16O15492 202 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 SNX3O60493 162 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 IL1BP01584 269 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ZFXP17010 805 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 CCT5P48643 541 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 PGGT1BP53609 377 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms