RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PDX1P52945 283 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 CACNA2D1P54289 1103 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 CLDN10P78369 228 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 TFAMQ00059 246 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 STAT4Q14765 748 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ADALQ6DHV7 355 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 SLC39A4Q6P5W5 647 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 KLHDC10Q6PID8 442 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 HEATR4Q86WZ0 1026 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF295-AS1Q8N0V1 137 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 SLC34A3Q8N130 599 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 FBXO39Q8N4B4 442 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF366Q8N895 744 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 HEXIM2Q96MH2 286 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 OMDQ99983 421 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 RAB34Q9BZG1 259 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 NEUROG2Q9H2A3 272 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 TLR8Q9NR97 1041 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 NDFIP2Q9NV92 336 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 TMEM30AQ9NV96 361 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 KLHL11Q9NVR0 708 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 UCKL1Q9NWZ5 548 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ZDHHC3Q9NYG2 299 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 DONSONQ9NYP3 566 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 SERGEFQ9UGK8 458 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 SUN2Q9UH99 717 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 AGO2Q9UKV8 859 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 R3HCC1Q9Y3T6 440 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 ATP8B3O60423 1300 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1W2PP55 124 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1W2PQ27 194 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1W2PQ64 194 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1W2PQC6 194 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 EME2A4GXA9 379 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 TMX2-CTNND1H3BSU7 103 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 K7ENM7 598 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 K7ESM1 405 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SCAMP1O15126 338 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SEMA7AO75326 666 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 ATP5BP06576 529 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 KRT19P08727 400 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 DLDP09622 509 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 RNF224P0DH78 156 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 WT1P19544 449 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 NOS2P35228 1153 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 UGT1A5P35504 534 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 ADPRHP54922 357 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 RBP5P82980 135 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SPIDRQ14159 915 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 CST6Q15828 149 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 LACTB2Q53H82 288 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 GUSBP11Q6P575 273 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 RAB11FIP2Q7L804 512 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 EFL1Q7Z2Z2 1120 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 PRPF39Q86UA1 669 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 DTX1Q86Y01 620 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 CSGALNACT2Q8N6G5 542 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 BEND7Q8N7W2 519 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 OR6B3Q8NGW1 331 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SCAMP5Q8TAC9 235 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 KCNB2Q92953 911 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 NAT6Q93015 286 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 IFT43Q96FT9 208 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 P2RY11Q96G91 374 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 CALR3Q96L12 384 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SRRTQ9BXP5 876 aaKnown RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 DCLK3Q9C098 648 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF518BQ9C0D4 1074 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 STRADBQ9C0K7 418 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 FBXO44Q9H4M3 255 aa8.22□□□□□ -1.09
LINC01961-201ENST00000449954 DMAP1Q9NPF5 467 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF71Q9NQZ8 489 aaPredicted RBP8.22□□□□□ -1.09
LINC01961-201ENST00000449954 SLC12A8A0AV02 714 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 PRAMEF26H0Y7S4 382 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 MID1O15344 667 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 RNGTTO60942 597 aaKnown RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 CDC45O75419 566 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 STC2O76061 302 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 CLDN1O95832 211 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 PDGFRBP09619 1106 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 JMJD7P0C870 316 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 GNLYP22749 145 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 TXLNAP40222 546 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 HNRNPKP61978 463 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 TOB2Q14106 344 aaPredicted RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 CDKN3Q16667 212 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 SND1Q7KZF4 910 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 TIPARPQ7Z3E1 657 aaKnown RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 TADA2BQ86TJ2 420 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 FAM114A1Q8IWE2 563 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 DIS3L2Q8IYB7 885 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms