RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ATP6V1B2P21281 511 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 SLC7A2P52569 658 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 STILQ15468 1287 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 STK32CQ86UX6 486 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 KCNMB4Q86W47 210 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 CHSY1Q86X52 802 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 PCYOX1LQ8NBM8 494 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 HMGXB4Q9UGU5 601 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 DMTF1Q9Y222 760 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 CNTRLQ7Z7A1 2325 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SPEF2Q9C093 1822 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 HDAC3O15379 428 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 NCAM1P13591 858 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 TFEBP19484 476 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 PSMA4P25789 261 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 HMOX2P30519 316 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LRPAP1P30533 357 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 GABRB2P47870 512 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 RBP5P82980 135 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LAMTOR4Q0VGL1 99 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LAMC2Q13753 1193 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 KCTD2Q14681 263 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 MYLK3Q32MK0 819 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LSM12Q3MHD2 195 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 IL23RQ5VWK5 629 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 HERC6Q8IVU3 1022 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 MICU2Q8IYU8 434 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SEPT1Q8WYJ6 367 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LPGAT1Q92604 370 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 CASP10Q92851 521 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 CERS2Q96G23 380 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 RERGLQ9H628 205 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 KCNK13Q9HB14 408 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 GPAMQ9HCL2 828 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 DDIT4Q9NX09 232 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 C4AP0C0L4 1744 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 LACTBL1A8MY62 500 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 ADORA2AP29274 412 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 CRHR1P34998 444 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 HSPA13P48723 471 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 IRF9Q00978 393 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 TSTA3Q13630 321 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 GLMNQ92990 594 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 MRPS26Q9BYN8 205 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 TRIM8Q9BZR9 551 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 C20orf27Q9GZN8 174 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 SH3GLB1Q9Y371 365 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 HUS1O60921 280 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 STMN1P16949 149 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 PPP1R8Q12972 351 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 BNIP3Q12983 259 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 CAPRIN1Q14444 709 aaKnown RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 NOMO1Q15155 1222 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 EGFLAMQ63HQ2 1017 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 NCKIPSDQ9NZQ3 722 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 XPR1Q9UBH6 696 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 NUDT5Q9UKK9 219 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 STAP1Q9ULZ2 295 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 ASB3Q9Y575 518 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 TIMM13Q9Y5L4 95 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-204ENST00000449510 ORC6Q9Y5N6 252 aa12.64□□□□□ -0.39
UBE3B-204ENST00000449510 A0A087WZ62 844 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 TRAFD1O14545 582 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SH3BP5O60239 455 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 DDHD2O94830 711 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ESRRBO95718 433 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 DLGAP3O95886 979 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 KCNA2P16389 499 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 RAP1GDS1P52306 607 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 RABGGTBP53611 331 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 AP3M2P53677 418 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 HPCAP84074 193 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 GNA12Q03113 381 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 LSAMPQ13449 338 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 PDK2Q15119 407 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ARCQ7LC44 396 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 BRSK2Q8IWQ3 736 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 FDXACB1Q9BRP7 624 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 TRIM15Q9C019 465 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CHRAC1Q9NRG0 131 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 C6orf203Q9P0P8 240 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms