RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RSPO2Q6UXX9 243 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TAS1R1Q7RTX1 841 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TMEM173Q86WV6 379 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 GPR65Q8IYL9 337 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF567Q8N184 647 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CCDC33Q8N5R6 958 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BCL7CQ8WUZ0 217 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MAML1Q92585 1016 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF689Q96CS4 500 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 XPO6Q96QU8 1125 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 EBNA1BP2Q99848 306 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 HERC2P3Q9BVR0 1158 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 OSER1Q9NX31 292 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 NKIRAS1Q9NYS0 192 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TBK1Q9UHD2 729 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 IQANK1A0A1B0GTG1 560 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 WDR27A2RRH5 827 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 GMNCA6NCL1 334 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 ERICH4A6NGS2 130 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SDR42E2A6NKP2 422 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 E9PAM4 449 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 KIAA0355O15063 1070 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CSH1P0DML2 217 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CSH2P0DML3 217 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 RAG1P15918 1043 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 OR1D2P34982 312 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 PPM1AP35813 382 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TUBP50607 506 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 LBX1P52954 281 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC18A1P54219 525 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CREMQ03060 361 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 EFEMP1Q12805 493 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 ANO4Q32M45 955 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TEX44Q53QW1 395 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 LGSNQ5TDP6 509 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TTC19Q6DKK2 380 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CYS1Q717R9 158 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TRABD2AQ86V40 505 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SRRM1Q8IYB3 904 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC39A11Q8N1S5 342 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 ATPAF2Q8N5M1 289 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TTC9BQ8N6N2 239 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 NPWQ8N729 165 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 RTL3Q8N8U3 475 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 STKLD1Q8NE28 680 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF461Q8TAF7 563 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 PAWRQ96IZ0 340 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SMC6Q96SB8 1091 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 DHRS4Q9BTZ2 278 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 GBA3Q9H227 469 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CCDC134Q9H6E4 229 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 RETREG1Q9H6L5 497 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SSU72Q9NP77 194 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 KCNK9Q9NPC2 374 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SPG21Q9NZD8 308 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 CTNNAL1Q9UBT7 734 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 RSPH14Q9UHP6 348 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SMG5Q9UPR3 1016 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 HBS1LQ9Y450 684 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 SNX10Q9Y5X0 201 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 HS3ST4Q9Y661 456 aa10.83□□□□□ -0.68
VIPAS39-203ENST00000448935 TCRBV9S1A1TA0A576 114 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 TMEM120BA0PK00 339 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 KCNK1O00180 336 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 VNN2O95498 520 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM107AO95990 144 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 URODP06132 367 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 INHBAP08476 426 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 RHOQP17081 205 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 PSMB4P28070 264 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 GCAP28676 217 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 PPP3CCP48454 512 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 PGFP49763 221 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 NDST2P52849 883 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 DSG1Q02413 1049 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 VEPH1Q14D04 833 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 LRRC26Q2I0M4 334 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SYCP2LQ5T4T6 812 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SNX30Q5VWJ9 437 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF534Q76KX8 674 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 GSDMBQ8TAX9 411 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 DYDC1Q8WWB3 177 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 ALKBH8Q96BT7 664 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 STAMBPL1Q96FJ0 436 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 CFAP36Q96G28 342 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SGSM3Q96HU1 749 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SIGLEC10Q96LC7 697 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 TEKT5Q96M29 485 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 ZYG11BQ9C0D3 744 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms