RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TSPAN3O60637 253 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 DLDP09622 509 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 PABPC1P11940 636 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 GPD2P43304 727 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 SLC11A2P49281 568 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 DAOAP59103 153 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 NOMO3P69849 1222 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 CDK17Q00537 523 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 CLEC16AQ2KHT3 1053 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 ASTE1Q2TB18 679 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 FNDC3BQ53EP0 1204 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 NUGGCQ68CJ6 796 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 CHST9Q7L1S5 443 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 C1orf216Q8TAB5 229 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 SETD7Q8WTS6 366 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 EDEM1Q92611 657 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 GOLGA1Q92805 767 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 DDX50Q9BQ39 737 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 LHX5Q9H2C1 402 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 OSGEPQ9NPF4 335 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 TM7SF3Q9NS93 570 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 ABCB8Q9NUT2 735 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 PCOLCE2Q9UKZ9 415 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 BZW2Q9Y6E2 419 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 ASPMQ8IZT6 3477 aa14.23□□□□□ -0.13
PDLIM2-213ENST00000448520 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 AKR1B10O60218 316 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 CBFA2T3O75081 653 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 FTH1P19P0C7X4 201 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 UNGP13051 313 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 HLA-EP13747 358 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 POLR2EP19388 210 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 AFF3P51826 1226 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 RING1Q06587 406 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 SFSWAPQ12872 951 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 TEAD4Q15561 434 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 HLA-BQ31612 363 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 MBLAC2Q68D91 279 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 SMYD5Q6GMV2 418 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 PMF1Q6P1K2 205 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 PHLDB2Q86SQ0 1253 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 ADIPOR2Q86V24 386 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 CDC6Q99741 560 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 BTBD1Q9H0C5 482 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 DEF6Q9H4E7 631 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 SGK2Q9HBY8 427 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 NENFQ9UMX5 172 aa14.22□□□□□ -0.13
PDLIM2-213ENST00000448520 DMXL2Q8TDJ6 3036 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 FLRT2O43155 660 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 FBXO21O94952 628 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 IGLV3-27P01718 113 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 DNTTP04053 509 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 ERBB2P04626 1255 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 LCP1P13796 627 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 CDH5P33151 784 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 PDCLQ13371 301 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 PTPN20Q4JDL3 420 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 PIK3R6Q5UE93 754 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 CCNI2Q6ZMN8 369 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 MMS22LQ6ZRQ5 1243 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 FAM124AQ86V42 546 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 TMTC1Q8IUR5 882 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 TMEM35BQ8NCS4 154 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 CCDC42Q96M95 316 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 CPXM1Q96SM3 734 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 DESI2Q9BSY9 194 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 PACSIN1Q9BY11 444 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 PRSS16Q9NQE7 514 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 ST7Q9NRC1 585 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 RALYQ9UKM9 306 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 SCML1Q9UN30 329 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 TFR2Q9UP52 801 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 NCKAP1Q9Y2A7 1128 aa14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-213ENST00000448520 AKAP13Q12802 2813 aa14.21□□□□□ -0.14
PDLIM2-213ENST00000448520 URB1O60287 2271 aaKnown RBP14.21□□□□□ -0.14
PDLIM2-213ENST00000448520 ZZEF1O43149 2961 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 PKD1L2Q7Z442 2459 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 PLXNB3Q9ULL4 1909 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 A0A0U1RQJ8 604 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 TYW5A2RUC4 315 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ACSL4O60488 711 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 TBL1XO60907 577 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 SEMA4FO95754 770 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 LTFP02788 710 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CAPNS1P04632 268 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ACSL1P33121 698 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CSNK1EP49674 416 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 TBX4P57082 545 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ST8SIA6P61647 398 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms