RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 TMEM62Q0P6H9 643 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 LSM12Q3MHD2 195 aaKnown RBP16.17■□□□□ 0.18
CHRD-205ENST00000448472 SLC9A4Q6AI14 798 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 FSTL4Q6MZW2 842 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 KCTD15Q96SI1 283 aaPredicted RBP16.17■□□□□ 0.18
CHRD-205ENST00000448472 TBCBQ99426 244 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 HES2Q9Y543 173 aa16.17■□□□□ 0.18
CHRD-205ENST00000448472 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
CHRD-205ENST00000448472 RGSL1A5PLK6 1076 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 FAM189A1O60320 539 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PTPRAP18433 802 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 ME2P23368 584 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 L1CAMP32004 1257 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PTK2BQ14289 1009 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PGM2L1Q6PCE3 622 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 TSHZ1Q6ZSZ6 1077 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 KBTBD6Q86V97 674 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 ZFP28Q8NHY6 868 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 USP33Q8TEY7 942 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 BTBD9Q96Q07 612 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PKP2Q99959 881 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 MRPL45Q9BRJ2 306 aaKnown RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 BCO2Q9BYV7 579 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 C6orf203Q9P0P8 240 aaPredicted RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 CDYLQ9Y232 598 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 TPST1O60507 370 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 GPC4O75487 556 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 TFAP2AP05549 437 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 GRM1Q13255 1194 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 C4orf22Q6V702 233 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 TTC30AQ86WT1 665 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 AGBL3Q8NEM8 1001 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PDCD6IPQ8WUM4 868 aaKnown RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 HAPLN3Q96S86 360 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 CYP3A43Q9HB55 503 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 STK39Q9UEW8 545 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 RUVBL2Q9Y230 463 aaKnown RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 STRNO43815 780 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 ENDOD1O94919 500 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 GRIA4P48058 902 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 ADARP55265 1226 aaKnown RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 XIAPP98170 497 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 MPP3Q13368 585 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 MYLK3Q32MK0 819 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 CCDC153Q494R4 210 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 LCLAT1Q6UWP7 414 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 GADL1Q6ZQY3 521 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 TP53INP2Q8IXH6 220 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHRD-205ENST00000448472 URGCPQ8TCY9 931 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 EFCAB1Q9HAE3 211 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 GBA2Q9HCG7 927 aaPredicted RBP16.16■□□□□ 0.18
CHRD-205ENST00000448472 MKS1Q9NXB0 559 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
CHRD-205ENST00000448472 ARHGEF37A1IGU5 675 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 GEN1Q17RS7 908 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 ARL13AQ5H913 290 aaPredicted RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 CERCAMQ5T4B2 595 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 METTL7BQ6UX53 244 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 DIS3LQ8TF46 1054 aaKnown RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 ATP6V1E2Q96A05 226 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 DCUN1D5Q9BTE7 237 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 CYP4F12Q9HCS2 524 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 ZDHHC7Q9NXF8 308 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 LMCD1Q9NZU5 365 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 VANGL2Q9ULK5 521 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 IRF6O14896 467 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 SEMA5AQ13591 1074 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 TARBP2Q15633 366 aaKnown RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 ZBTB46Q86UZ6 589 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 ACE2Q9BYF1 805 aaPredicted RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 PCDHAC1Q9H158 963 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 IL1RL2Q9HB29 575 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 CHCHD3Q9NX63 227 aaKnown RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 PTTG2Q9NZH5 202 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 H3BNX3 289 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 GSRP00390 522 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 DGKDQ16760 1214 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 LRRC8EQ6NSJ5 796 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 OLFML1Q6UWY5 402 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 MYO1HQ8N1T3 1032 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 PPP1R13LQ8WUF5 828 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 APBA2Q99767 749 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 TMEM79Q9BSE2 394 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 LRRC40Q9H9A6 602 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
CHRD-205ENST00000448472 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
CHRD-205ENST00000448472 HDAC3O15379 428 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 MS4A2Q01362 244 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 PDAP1Q13442 181 aaKnown RBP16.14■□□□□ 0.17
CHRD-205ENST00000448472 SLC10A6Q3KNW5 377 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 TMEM259Q4ZIN3 620 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
CHRD-205ENST00000448472 GRTP1Q5TC63 336 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 TIFABQ6ZNK6 161 aa16.14■□□□□ 0.17
CHRD-205ENST00000448472 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms