RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 OPHN1O60890 802 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 SPAG6O75602 509 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 DCTN3O75935 186 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 ENO1P06733 434 aaKnown RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 GRIK1P39086 918 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 CHRNA4P43681 627 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 LHX1P48742 406 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 KDSRQ06136 332 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 MGAT3Q09327 533 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 NIPAL4Q0D2K0 466 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 PCBP1Q15365 356 aaKnown RBP eCLIP15.15■□□□□ 0.029e-8■■■□□ 15.7
SF1-211ENST00000448404 OVOS1Q6IE37 1185 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 TFAP2DQ7Z6R9 452 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 C14orf80Q86SX3 495 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 EGFL6Q8IUX8 553 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 C10orf107Q8IVU9 208 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 BRD8Q9H0E9 1235 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 FAM124BQ9H5Z6 455 aaPredicted RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 VANGL2Q9ULK5 521 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 MEI4A8MW99 385 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
SF1-211ENST00000448404 GJB3O75712 270 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 GLUD2P49448 558 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 SESN3P58005 492 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 POU6F1Q14863 301 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 SLC39A12Q504Y0 691 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 ZNF280DQ6N043 979 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 ARCQ7LC44 396 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 RTN4RL1Q86UN2 441 aaPredicted RBP15.14■□□□□ 0.01
SF1-211ENST00000448404 PPP1R14CQ8TAE6 165 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 CNGB3Q9NQW8 809 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 TXLNGQ9NUQ3 528 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 SLC38A7Q9NVC3 462 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 PNPOQ9NVS9 261 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 RNF186Q9NXI6 227 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 MTO1Q9Y2Z2 717 aaKnown RBP15.14■□□□□ 0.01
SF1-211ENST00000448404 ARHGAP42A6NI28 874 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 CCL22O00626 93 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 ADAMTS4O75173 837 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 HAUS5O94927 633 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 ANP32DO95626 131 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 TYK2P29597 1187 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 PEX19P40855 299 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 GLRBP48167 497 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 SLC5A3P53794 718 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 TEX44Q53QW1 395 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 STRA8Q7Z7C7 330 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 CERS2Q96G23 380 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 CADM1Q9BY67 442 aaKnown RBP15.14■□□□□ 0.01
SF1-211ENST00000448404 DENND2DQ9H6A0 471 aaPredicted RBP15.14■□□□□ 0.01
SF1-211ENST00000448404 CDH9Q9ULB4 789 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
SF1-211ENST00000448404 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 FAM155AB1AL88 458 aaPredicted RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 STK10O94804 968 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 IGHA2P01877 340 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 HMBSP08397 361 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SCNN1AP37088 669 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 FDFT1P37268 417 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 INTS6LQ5JSJ4 861 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 POU5F2Q8N7G0 328 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 IPMKQ8NFU5 416 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 RSPH1Q8WYR4 309 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 LRMDAQ9H2I8 198 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 IARS2Q9NSE4 1012 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 SLC2A6Q9UGQ3 507 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 TRPM7Q96QT4 1865 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 PHGDHO43175 533 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 PMPCBO75439 489 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 BPGMP07738 259 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 TSHRP16473 764 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 PGAM1P18669 254 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SLC8A1P32418 973 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 GCKP35557 465 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 MAXP61244 160 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 USP46P62068 366 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 CDK16Q00536 496 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 MBTPS1Q14703 1052 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 PCSK7Q16549 785 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 CHSY1Q86X52 802 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 CIR1Q86X95 450 aaPredicted RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SOCS4Q8WXH5 440 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SKA1Q96BD8 255 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 RILPQ96NA2 401 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 MAN1C1Q9NR34 630 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 MTF2Q9Y483 593 aaPredicted RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 NT5C1B-RDH14C9J2C7 533 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 AOC2O75106 756 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms