RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PCDH18Q9HCL0 1135 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 MPP6Q9NZW5 540 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RCOR3Q9P2K3 495 aaPredicted RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 GFRA2O00451 464 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 TULP3O75386 442 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 PAPSS2O95340 614 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 GOT1P17174 413 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 KDELR1P24390 212 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CTNNA2P26232 953 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 HOXD9P28356 352 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 MAPKAPK2P49137 400 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 DNA2P51530 1060 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 SGSHP51688 502 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 GNG11P61952 73 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CSTF1Q05048 431 aaKnown RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 GAS6Q14393 721 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 C5orf22Q49AR2 442 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CYP4V2Q6ZWL3 525 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CIR1Q86X95 450 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF683Q8IZ20 524 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 EXD1Q8NHP7 514 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 FIBINQ8TAL6 211 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 RAPGEF5Q92565 580 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CD101Q93033 1021 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 NKD2Q969F2 451 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 MYEOVQ96EZ4 313 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CSPG4P5Q96PW8 444 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 MAGEB5Q9BZ81 275 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 ARHGEF4Q9NR80 690 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 RBM12Q9NTZ6 932 aaKnown RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 KIAA1522Q9P206 1035 aaPredicted RBP11.91□□□□□ -0.5
LINC00408-201ENST00000447784 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 PCDHGA2Q9Y5H1 932 aa11.91□□□□□ -0.5
LINC00408-201ENST00000447784 USP27XA6NNY8 438 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 GFRA3O60609 400 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 CNTN5O94779 1100 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 APODP05090 189 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 RHOCP08134 193 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ETFBP38117 255 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 GRIA2P42262 883 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 CXCL12P48061 93 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 SLC6A11P48066 632 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 GALK1P51570 392 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 NRLP54845 237 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 KDSRQ06136 332 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 SEMA3BQ13214 749 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 DPYSL3Q14195 570 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 E2F5Q15329 346 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ALFQ53S48 1182 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 MANEALQ5VSG8 457 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 FSTL4Q6MZW2 842 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF354CQ86Y25 554 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ZBTB44Q8NCP5 570 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 CCDC26Q8TAB7 109 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 KRT35Q92764 455 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 KCND1Q9NSA2 647 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 PACSIN2Q9UNF0 486 aaPredicted RBP11.9□□□□□ -0.5
LINC00408-201ENST00000447784 ZKSCAN5Q9Y2L8 839 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 PATJQ8NI35 1801 aa11.9□□□□□ -0.5
LINC00408-201ENST00000447784 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 CHURC1-FNTBB4DL54 471 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 TIMM44O43615 452 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 RAMP2O60895 175 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ATG13O75143 517 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 KAT7O95251 611 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
LINC00408-201ENST00000447784 TDGF1P13385 188 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ERCC2P18074 760 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 HOXA6P31267 233 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 SERPINB6P35237 376 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 OPRD1P41143 372 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 IRAK1P51617 712 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ARSEP51690 589 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 COPS2P61201 443 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 TFDP2Q14188 446 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 DMC1Q14565 340 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 GAB4Q2WGN9 574 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 MEI1Q5TIA1 1274 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ZNF783Q6ZMS7 281 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 SPOCD1Q6ZMY3 1216 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 Q6ZS52 159 aa11.89□□□□□ -0.51
LINC00408-201ENST00000447784 ASCL5Q7RTU5 278 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms