RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 GABRB2P47870 512 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 ZNF445P59923 1031 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 LY6DQ14210 128 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 SYPL2Q5VXT5 272 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 IRF2BP2Q7Z5L9 587 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 FAM149B1Q96BN6 582 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 PLD4Q96BZ4 506 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 TTYH3Q9C0H2 523 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 ASNSD1Q9NWL6 643 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 SFMBT1Q9UHJ3 866 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 NAALADL1Q9UQQ1 740 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
SSR4-205ENST00000447375 KCNK3O14649 394 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 PCDHGA12O60330 932 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 IGLV3-27P01718 113 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
SSR4-205ENST00000447375 HMBSP08397 361 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 FERP16591 822 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 OXTRP30559 389 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 CSRP3P50461 194 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 NOMO3P69849 1222 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 FMO1Q01740 532 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 ARID5AQ03989 594 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 TAF5Q15542 800 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 FIGNQ5HY92 759 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 TRIM72Q6ZMU5 477 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 FAM183BPQ6ZVS7 135 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 ZNF397Q8NF99 534 aaPredicted RBP12.9□□□□□ -0.34
SSR4-205ENST00000447375 C1orf216Q8TAB5 229 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
SSR4-205ENST00000447375 SLC2A13Q96QE2 648 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 AIPL1Q9NZN9 384 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
SSR4-205ENST00000447375 USP36Q9P275 1121 aaKnown RBP12.9□□□□□ -0.34
SSR4-205ENST00000447375 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
SSR4-205ENST00000447375 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 GFRA2O00451 464 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 HSF2BPO75031 334 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 NTRK1P04629 796 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 CDK4P11802 303 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 ACTN2P35609 894 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 CHKAP35790 457 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 SCNN1AP37088 669 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 HARS2P49590 506 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 CCT8P50990 548 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 NNTQ13423 1086 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 EIF4EBP2Q13542 120 aaPredicted RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 TEAD4Q15561 434 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 NAA35Q5VZE5 725 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 OR6B2Q6IFH4 312 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 FAM217AQ8IXS0 508 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 DQX1Q8TE96 717 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 CPA5Q8WXQ8 436 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
SSR4-205ENST00000447375 MARK1Q9P0L2 795 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 WDR35Q9P2L0 1181 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 STOML2Q9UJZ1 356 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 TLR6Q9Y2C9 796 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 ANKRD6Q9Y2G4 727 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SSR4-205ENST00000447375 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 BRINP1O60477 761 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 LATS1O95835 1130 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 C1SP09871 688 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 MMP8P22894 467 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 TPMTP51580 245 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 TBX4P57082 545 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 STARD3Q14849 445 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 FUT11Q495W5 492 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 DCAF6Q58WW2 860 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 ARHGAP40Q5TG30 622 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms