RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 VNN1O95497 513 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 SRPRAP08240 638 aaKnown RBP7.35□□□□□ -1.23
LRRC28-203ENST00000447360 GIMD1P0DJR0 217 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 CR2P20023 1033 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 CD70P32970 193 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 STAT6P42226 847 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 ASPAP45381 313 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 YWHAGP61981 247 aaKnown RBP eCLIP7.35□□□□□ -1.23
LRRC28-203ENST00000447360 PPP2CBP62714 309 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 PPP2CAP67775 309 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 ZSCAN23Q3MJ62 389 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 KMT5BQ4FZB7 885 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 C3orf38Q5JPI3 329 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 C12orf56Q8IXR9 622 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 TPCN2Q8NHX9 752 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 FIBINQ8TAL6 211 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 MAPK15Q8TD08 544 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 PARD3BQ8TEW8 1205 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 ZDHHC16Q969W1 377 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 SGF29Q96ES7 293 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 KLHDC7BQ96G42 594 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 LMLNQ96KR4 655 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 MRGPRX3Q96LB0 322 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 APOLD1Q96LR9 279 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 FAM129BQ96TA1 746 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 LRRC27Q9C0I9 530 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 DNAI2Q9GZS0 605 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 OSBPL2Q9H1P3 480 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 UCKL1Q9NWZ5 548 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 NLGN3Q9NZ94 848 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 NCKIPSDQ9NZQ3 722 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 CYTH4Q9UIA0 394 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 UBE4BO95155 1302 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ITIH6Q6UXX5 1313 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 LY6G6EA0A0G2JKS1 128 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CLEC18AA5D8T8 446 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 LRRIQ3A6PVS8 624 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 SCAMP1O15126 338 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 SPTLC2O15270 562 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 EXOC3O60645 756 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TBL1XO60907 577 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PPP6R2O75170 966 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TCEA3O75764 348 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PIAS2O75928 621 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 KIF20AO95235 890 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ZBED1O96006 694 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ASS1P00966 412 aaKnown RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 IL1BP01584 269 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ITGA2BP08514 1039 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ZSCAN22P10073 491 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 MYF5P13349 255 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 DRD3P35462 400 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CSKP41240 450 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PSMD8P48556 350 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CASP4P49662 377 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 NFKB2Q00653 900 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TLE1Q04724 770 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 KCNMA1Q12791 1236 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ELAVL3Q14576 367 aaKnown RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ZACNQ401N2 412 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 SETMARQ53H47 684 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 RAB41Q5JT25 222 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PIK3R6Q5UE93 754 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PM20D1Q6GTS8 502 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CLEC18BQ6UXF7 455 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TRIM69Q86WT6 500 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CLEC18CQ8NCF0 446 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 WDR36Q8NI36 951 aaKnown RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 IFI44Q8TCB0 444 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 WFDC5Q8TCV5 224 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 PLEKHO2Q8TD55 490 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 FOXD4L4Q8WXT5 416 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-203ENST00000447360 EXTL1Q92935 676 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ELMO3Q96BJ8 720 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 IFT43Q96FT9 208 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ATXN7L3BQ96GX2 97 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TWNKQ96RR1 684 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 TNMDQ9H2S6 317 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 CYP3A43Q9HB55 503 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ZDHHC9Q9Y397 364 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 ENTPD2Q9Y5L3 495 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 U3KQA8 63 aa7.34□□□□□ -1.23
LRRC28-203ENST00000447360 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 NBASA2RRP1 2371 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PLXNA2O75051 1894 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 RCCD1A6NED2 376 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 TTC34A8MYJ7 566 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 K7ESM1 405 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 FFAR2O15552 330 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PLRG1O43660 514 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PPFIA2O75334 1257 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 TNFSF15O95150 251 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 F13A1P00488 732 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms