RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BIN1O00499 593 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 NPC1O15118 1278 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 SLITRK3O94933 977 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 OAS1P00973 400 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 CISD3P0C7P0 127 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 ACADMP11310 421 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 RARGP13631 454 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 CYP3A5P20815 502 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PROZP22891 400 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 LILRA4P59901 499 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 CTTNQ14247 550 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 DDR2Q16832 855 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 MOXD1Q6UVY6 613 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 APBB1IPQ7Z5R6 666 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 SPATS2Q86XZ4 545 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 ADGRF2Q8IZF7 708 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 TOP6BLQ8N6T0 577 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 LEO1Q8WVC0 666 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 DYDC2Q96IM9 177 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 HRASLS5Q96KN8 279 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 SENP8Q96LD8 212 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 BTBD1Q9H0C5 482 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 GZF1Q9H116 711 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 TNKS2Q9H2K2 1166 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 CBX8Q9HC52 389 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 KCNMB3Q9NPA1 279 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 CASS4Q9NQ75 786 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 DNAJC17Q9NVM6 304 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 THAP10Q9P2Z0 257 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 PHTF1Q9UMS5 762 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PCDHB5Q9Y5E4 795 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 SLC12A7Q9Y666 1083 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 CSPG4Q6UVK1 2322 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 ARHGAP10A1A4S6 786 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 TLR4O00206 839 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 HIP1O00291 1037 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PPEF2O14830 753 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 NVLO15381 856 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 PRC1O43663 620 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PRPF40AO75400 957 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 TCEA3O75764 348 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 MAPK1P28482 360 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 GNA11P29992 359 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 NAMPTP43490 491 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 HARS2P49590 506 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 KIAA0895LQ68EN5 471 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PPP4R3AQ6IN85 833 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 UBE3DQ7Z6J8 389 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 MICU3Q86XE3 530 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 DDX42Q86XP3 938 aaKnown RBP eCLIP3.46□□□□□ -1.86
PMS1-215ENST00000447232 CACUL1Q86Y37 369 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 RBBP8NLQ8NC74 664 aaPredicted RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 MAPK15Q8TD08 544 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 TBCKQ8TEA7 893 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 PDCD6IPQ8WUM4 868 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 TRIM9Q9C026 710 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 ABCG4Q9H172 646 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 OSBPL2Q9H1P3 480 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 LHX5Q9H2C1 402 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 USP29Q9HBJ7 922 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 RBM28Q9NW13 759 aaKnown RBP3.46□□□□□ -1.86
PMS1-215ENST00000447232 SMPD4Q9NXE4 827 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 SEPT10Q9P0V9 454 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 ITGB1BP2Q9UKP3 347 aa3.46□□□□□ -1.86
PMS1-215ENST00000447232 SCN1AP35498 2009 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 PLD2O14939 933 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 SLC37A4O43826 429 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 SDC3O75056 442 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 MCF2P10911 925 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 PAX3P23760 479 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 CYP2F1P24903 491 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 GSTT1P30711 240 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 RP1P56715 2156 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 KCNJ12Q14500 433 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 ANO4Q32M45 955 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 ZNF568Q3ZCX4 644 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 CASC1Q6TDU7 716 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 RBM44Q6ZP01 1051 aaKnown RBP3.45□□□□□ -1.86
PMS1-215ENST00000447232 TMC6Q7Z403 805 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 BBS7Q8IWZ6 715 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 DCP1BQ8IZD4 617 aaKnown RBP3.45□□□□□ -1.86
PMS1-215ENST00000447232 OR2T3Q8NH03 318 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 RILPL2Q969X0 211 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 APOLD1Q96LR9 279 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 PKMYT1Q99640 499 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 ACO2Q99798 780 aaKnown RBP3.45□□□□□ -1.86
PMS1-215ENST00000447232 HSD17B14Q9BPX1 270 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 SGK2Q9HBY8 427 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 SEL1LQ9UBV2 794 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 FBXO10Q9UK96 956 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 DSEQ9UL01 958 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 RTTNQ86VV8 2226 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 COL6A5A8TX70 2615 aa3.45□□□□□ -1.86
PMS1-215ENST00000447232 PRRC2CQ9Y520 2896 aaKnown RBP3.45□□□□□ -1.86
PMS1-215ENST00000447232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.45□□□□□ -1.86
PMS1-215ENST00000447232 USO1O60763 962 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms