RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 NPHP3Q7Z494 1330 aa2.87□□□□□ -1.95
UBBP3-201ENST00000445497 PTPRGP23470 1445 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 NCOA3Q9Y6Q9 1424 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 A0A0A6YYJ9 748 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 A0A0J9YYE9 177 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 A0A1W2PQ09 198 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TRBC2A0A5B9 178 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CCDC154A6NI56 674 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ZSCAN5BA6NJL1 495 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GOLGA8JA6NMD2 632 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 DBX1A6NMT0 343 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF716A6NP11 495 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CLCA1A8K7I4 914 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 A8MV72 311 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MYO1GB0I1T2 1018 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CENPBD1B2RD01 187 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SLCO1B7G3V0H7 640 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 UBE2Q2LH0YL09 131 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GOLGA8TH3BQL2 631 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 H7C1D1 291 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PSMD11O00231 422 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PRRG1O14668 218 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 EREGO14944 169 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MED7O43513 233 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 HCRTR2O43614 444 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 DLX3O60479 287 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF821O75541 412 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CDC123O75794 336 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RPP40O75818 363 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SERPINI2O75830 405 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SEC24DO94855 1032 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SPDEFO95238 335 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PDE8BO95263 885 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 AHSA1O95433 338 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MBD3O95983 291 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CHEK2O96017 543 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 AK1P00568 194 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 F9P00740 461 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 IFNA14P01570 189 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TRBC1P01850 177 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CYP2E1P05181 493 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TUBBP07437 444 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 NFICP08651 508 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RPS17P08708 135 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 KRT19P08727 400 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 KRT7P08729 469 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 IGFBP1P08833 259 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF735P0CB33 412 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GOLGA8HP0CJ92 632 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ACRP10323 421 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TYRP14679 529 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 BRAFP15056 766 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CTRB1P17538 263 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PRKACAP17612 351 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ERCC2P18074 760 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CYP2B6P20813 491 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ITPKAP23677 461 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CPT2P23786 658 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PTPN3P26045 913 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MAP4P27816 1152 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TKTP29401 623 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SLC7A1P30825 629 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 IL13P35225 146 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PGM1P36871 562 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GRM5P41594 1212 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ALDH3B1P43353 468 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RANBP1P43487 201 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CDKN1BP46527 198 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SLC11A2P49281 568 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MTNR1BP49286 362 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 POU3F4P49335 361 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RGS7P49802 495 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 HSD17B4P51659 736 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CCR3P51677 355 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MRPL12P52815 198 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SUCLG1P53597 346 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 OAZ1P54368 228 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MLLT6P55198 1093 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CDH6P55285 790 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 OXCT1P55809 520 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 STX17P56962 302 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 COPS2P61201 443 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RAB1AP62820 205 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TUBB4BP68371 445 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RNF4P78317 190 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ATP2C1P98194 919 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 FMO1Q01740 532 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GUCY1B3Q02153 619 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SPIRE1Q08AE8 756 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SLFN5Q08AF3 891 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 GALNT2Q10471 571 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MYO1EQ12965 1108 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RESTQ13127 1097 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 DYNC1I2Q13409 638 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 ADAM9Q13443 819 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 DRP2Q13474 957 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TUBB2AQ13885 445 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 FGL2Q14314 439 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CLCA4Q14CN2 919 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 HERC3Q15034 1050 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms