RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ADH1CP00326 375 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 ADH5P11766 374 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 KDELR1P24390 212 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 EPHB2P29323 1055 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 RWDD2BP57060 319 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 ZNF211Q13398 564 aaPredicted RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 RUNX3Q13761 415 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 DPYSL3Q14195 570 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 DPYSL2Q16555 572 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 MPPE1Q53F39 396 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 KATNAL2Q8IYT4 538 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 CARNMT1Q8N4J0 409 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 P2RY11Q96G91 374 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 C16orf45Q96MC5 204 aaPredicted RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 WDR24Q96S15 920 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 ECT2Q9H8V3 914 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 NCDNQ9UBB6 729 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 SPTBN2O15020 2390 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 OTOL1A6NHN0 477 aaPredicted RBP17.71■□□□□ 0.43
LIME1-202ENST00000444951 SPECC1L-ADORA2AF8WAN1 911 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.432e-8■■■■■ 38.5
LIME1-202ENST00000444951 TYRP14679 529 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 TGM1P22735 817 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 CTHP32929 405 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 PEX5P50542 639 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 NR1H3Q13133 447 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 SEMA3BQ13214 749 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 PDK2Q15119 407 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 LPAL2Q16609 132 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ITPRIPL2Q3MIP1 535 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ALFQ53S48 1182 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.43
LIME1-202ENST00000444951 AADACL2Q6P093 401 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 MFSD7Q6UXD7 560 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 RFX8Q6ZV50 586 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 MAP7D3Q8IWC1 876 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ZNF683Q8IZ20 524 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 KIAA1958Q8N8K9 716 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 TLR10Q9BXR5 811 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 ZYG11BQ9C0D3 744 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 PARD6AQ9NPB6 346 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 JRKLQ9Y4A0 524 aa17.71■□□□□ 0.43
LIME1-202ENST00000444951 KCNK3O14649 394 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 ATP1A1P05023 1023 aaKnown RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 AMPD1P23109 780 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 NUMBP49757 651 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 ARSEP51690 589 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 GAD2Q05329 585 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 SRSF5Q13243 272 aaKnown RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 RSPO4Q2I0M5 234 aaPredicted RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 MANEALQ5VSG8 457 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 FYB2Q5VWT5 728 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 KAZNQ674X7 775 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 SPOCD1Q6ZMY3 1216 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 MAMSTRQ6ZN01 415 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 CCDC117Q8IWD4 279 aaPredicted RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 RCOR2Q8IZ40 523 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 RBM41Q96IZ5 413 aaKnown RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 CSPG4P5Q96PW8 444 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 C8orf33Q9H7E9 229 aaPredicted RBP17.7■□□□□ 0.42
LIME1-202ENST00000444951 DLL3Q9NYJ7 618 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
LIME1-202ENST00000444951 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 C3orf70A6NLC5 250 aaPredicted RBP17.69■□□□□ 0.42
LIME1-202ENST00000444951 DRGXA6NNA5 263 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 H0Y626 953 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 K7ESF4 209 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 GFRA2O00451 464 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 PYGMP11217 842 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 KRT10P13645 584 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 HOXD9P28356 352 aaPredicted RBP17.69■□□□□ 0.42
LIME1-202ENST00000444951 CXCR5P32302 372 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 CCR3P51677 355 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 DYNLT1P63172 113 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 PON2Q15165 354 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 DGLUCYQ7Z3D6 616 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 ANKS1BQ7Z6G8 1248 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 EXD1Q8NHP7 514 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 CHFRQ96EP1 664 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 IER2Q9BTL4 223 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 HEMGNQ9BXL5 484 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 MAK16Q9BXY0 300 aaKnown RBP17.69■□□□□ 0.42
LIME1-202ENST00000444951 FAM126AQ9BYI3 521 aaPredicted RBP17.69■□□□□ 0.42
LIME1-202ENST00000444951 CATSPERBQ9H7T0 1116 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 PPARGC1AQ9UBK2 798 aaKnown RBP17.69■□□□□ 0.42
LIME1-202ENST00000444951 CLEC4EQ9ULY5 219 aa17.69■□□□□ 0.42
LIME1-202ENST00000444951 IGLV3-10A0A075B6K4 115 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 CHURC1-FNTBB4DL54 471 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 PENKP01210 267 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 RHOQP17081 205 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 ERCC2P18074 760 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms