RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 WDR5BQ86VZ2 330 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 FRMD1Q8N878 549 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 PRRX2Q99811 253 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 FEM1AQ9BSK4 669 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 TMEM248Q9NWD8 314 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 THADAQ6YHU6 1953 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 RNF103O00237 685 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 CLDN11O75508 207 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 DLDP09622 509 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 VAV1P15498 845 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 NDUFV2P19404 249 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 L1CAMP32004 1257 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 PCK1P35558 622 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ACVRL1P37023 503 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 MTA1Q13330 715 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 RNF219Q5W0B1 726 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 TP53INP2Q8IXH6 220 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ACRBPQ8NEB7 543 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 FRS2Q8WU20 508 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 RPL10LQ96L21 214 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 MRPL47Q9HD33 250 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 ZSCAN32Q9NX65 697 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 KIAA1522Q9P206 1035 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 EBF1Q9UH73 591 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 SLCO3A1Q9UIG8 710 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
PDLIM2-212ENST00000443561 TCRBV21S2A2A0A5A6 115 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 TTC34A8MYJ7 566 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 ATG13O75143 517 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 PROSCO94903 275 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 NDUFA10O95299 355 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 MT-CO1P00395 513 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 RARAP10276 462 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 RHOQP17081 205 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 GOT1P17174 413 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 DPYSQ14117 519 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 PREPLQ4J6C6 727 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 EOGTQ5NDL2 527 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 CHPFQ8IZ52 775 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 NPWQ8N729 165 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 FAM71BQ8TC56 605 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 CTNNBL1Q8WYA6 563 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 TSC1Q92574 1164 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 ETNK2Q9NVF9 386 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 CWC15Q9P013 229 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 VPS51Q9UID3 782 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 SLC8A2Q9UPR5 921 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 ERVW-1Q9UQF0 538 aa13.19□□□□□ -0.3
PDLIM2-212ENST00000443561 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 DOCK9Q9BZ29 2069 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 TYW5A2RUC4 315 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 WASH4PA8MWX3 477 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 PROB1E7EW31 1015 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 K7ERQ8 282 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 DCLK1O15075 740 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 SMAD6O43541 496 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 ZNF821O75541 412 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 APBB3O95704 486 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 RHOCP08134 193 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 CD48P09326 243 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 BCKDHBP21953 392 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 IL4RP24394 825 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 DGKEP52429 567 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 AIF1P55008 147 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 ARF5P84085 180 aa13.18□□□□□ -0.3
PDLIM2-212ENST00000443561 ZNF177Q13360 481 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms