RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 NR1H3Q13133 447 aa8.78□□□□□ -1
RER1-205ENST00000443438 RAB33AQ14088 237 aa8.78□□□□□ -1
RER1-205ENST00000443438 SPARCL1Q14515 664 aa8.78□□□□□ -1
RER1-205ENST00000443438 TMED2Q15363 201 aa8.78□□□□□ -1
RER1-205ENST00000443438 ZSCAN26Q16670 478 aa8.78□□□□□ -1
RER1-205ENST00000443438 C5orf22Q49AR2 442 aa8.78□□□□□ -1
RER1-205ENST00000443438 TPGS2Q68CL5 300 aa8.78□□□□□ -1
RER1-205ENST00000443438 NADSYN1Q6IA69 706 aa8.78□□□□□ -1
RER1-205ENST00000443438 FAM117BQ6P1L5 589 aa8.78□□□□□ -1
RER1-205ENST00000443438 LEKR1Q6ZMV7 388 aa8.78□□□□□ -1
RER1-205ENST00000443438 SH2D5Q6ZV89 423 aa8.78□□□□□ -1
RER1-205ENST00000443438 CYS1Q717R9 158 aa8.78□□□□□ -1
RER1-205ENST00000443438 TAOK1Q7L7X3 1001 aa8.78□□□□□ -1
RER1-205ENST00000443438 PID1Q7Z2X4 250 aa8.78□□□□□ -1
RER1-205ENST00000443438 UBE2Q1Q7Z7E8 422 aa8.78□□□□□ -1
RER1-205ENST00000443438 DDX53Q86TM3 631 aaKnown RBP8.78□□□□□ -1
RER1-205ENST00000443438 UMODL1-AS1Q8N2C9 162 aa8.78□□□□□ -1
RER1-205ENST00000443438 ZNF461Q8TAF7 563 aa8.78□□□□□ -1
RER1-205ENST00000443438 SLC44A1Q8WWI5 657 aa8.78□□□□□ -1
RER1-205ENST00000443438 OVCA2Q8WZ82 227 aa8.78□□□□□ -1
RER1-205ENST00000443438 IGSF8Q969P0 613 aa8.78□□□□□ -1
RER1-205ENST00000443438 CFAP36Q96G28 342 aa8.78□□□□□ -1
RER1-205ENST00000443438 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
RER1-205ENST00000443438 ZNF419Q96HQ0 510 aaPredicted RBP8.78□□□□□ -1
RER1-205ENST00000443438 MYRFLQ96LU7 910 aa8.78□□□□□ -1
RER1-205ENST00000443438 ZNF317Q96PQ6 595 aaPredicted RBP8.78□□□□□ -1
RER1-205ENST00000443438 CCT8L2Q96SF2 557 aa8.78□□□□□ -1
RER1-205ENST00000443438 CYTH2Q99418 400 aa8.78□□□□□ -1
RER1-205ENST00000443438 PAFAH2Q99487 392 aa8.78□□□□□ -1
RER1-205ENST00000443438 VAT1Q99536 393 aa8.78□□□□□ -1
RER1-205ENST00000443438 TRIM56Q9BRZ2 755 aaKnown RBP8.78□□□□□ -1
RER1-205ENST00000443438 GBA3Q9H227 469 aa8.78□□□□□ -1
RER1-205ENST00000443438 TRABDQ9H4I3 376 aa8.78□□□□□ -1
RER1-205ENST00000443438 RABEP2Q9H5N1 569 aa8.78□□□□□ -1
RER1-205ENST00000443438 CATSPERBQ9H7T0 1116 aa8.78□□□□□ -1
RER1-205ENST00000443438 CCSER2Q9H7U1 834 aa8.78□□□□□ -1
RER1-205ENST00000443438 CASS4Q9NQ75 786 aa8.78□□□□□ -1
RER1-205ENST00000443438 MOCS1Q9NZB8 636 aa8.78□□□□□ -1
RER1-205ENST00000443438 SPG21Q9NZD8 308 aa8.78□□□□□ -1
RER1-205ENST00000443438 MPP6Q9NZW5 540 aa8.78□□□□□ -1
RER1-205ENST00000443438 MARCH2Q9P0N8 246 aa8.78□□□□□ -1
RER1-205ENST00000443438 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
RER1-205ENST00000443438 PSMC3IPQ9P2W1 217 aaPredicted RBP8.78□□□□□ -1
RER1-205ENST00000443438 ZC3H7BQ9UGR2 993 aaKnown RBP8.78□□□□□ -1
RER1-205ENST00000443438 PCDHA11Q9Y5I1 949 aa8.78□□□□□ -1
RER1-205ENST00000443438 MYO16Q9Y6X6 1858 aa8.78□□□□□ -1
RER1-205ENST00000443438 GREB1Q4ZG55 1949 aa8.78□□□□□ -1
RER1-205ENST00000443438 GOLGA6L7A0A1B0GV03 622 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 SDR42E2A6NKP2 422 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 FAM159BA6NKW6 160 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 MATN3O15232 486 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.015e-6■□□□□ 10.8
RER1-205ENST00000443438 TYROBPO43914 113 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 EFCAB14O75071 495 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 BAIAP3O94812 1187 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 AP2A1O95782 977 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 APOEP02649 317 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 LAG3P18627 525 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 NFKB1P19838 968 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 DRD4P21917 467 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 MGAT1P26572 445 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 STX2P32856 288 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 MSH2P43246 934 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 IFNAR2P48551 515 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 PAPOLAP51003 745 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 HNRNPH2P55795 449 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 SARNPP82979 210 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 TNK2Q07912 1038 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 OLIG2Q13516 323 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 BTG3Q14201 252 aaPredicted RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 KBTBD12Q3ZCT8 623 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 ALFQ53S48 1182 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 C10orf120Q5SQS8 335 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 FBXL22Q6P050 247 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 TRMT10BQ6PF06 316 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 NECAB2Q7Z6G3 386 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 SRRM1Q8IYB3 904 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 GPR65Q8IYL9 337 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 ATP6V0D2Q8N8Y2 350 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 BCAS4Q8TDM0 211 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 ZNF473Q8WTR7 871 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 FATE1Q969F0 183 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 STAMBPL1Q96FJ0 436 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 BTN2A3PQ96KV6 586 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 FERMT1Q9BQL6 677 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 ZYG11BQ9C0D3 744 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 KIF9Q9HAQ2 790 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 RXFP1Q9HBX9 757 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 IL23AQ9NPF7 189 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 PPANQ9NQ55 473 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 TMEM248Q9NWD8 314 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 HBS1LQ9Y450 684 aaKnown RBP8.77□□□□□ -1.01
RER1-205ENST00000443438 YIPF1Q9Y548 306 aa8.77□□□□□ -1.01
RER1-205ENST00000443438 ERI2A8K979 691 aaKnown RBP8.76□□□□□ -1.01
RER1-205ENST00000443438 RASA4BC9J798 803 aa8.76□□□□□ -1.01
RER1-205ENST00000443438 H3BNC9 293 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms