RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CTSOP43234 321 aaPredicted RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 GCLMP48507 274 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 VAMP7P51809 220 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 RAD23BP54727 409 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 ENPEPQ07075 957 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 KCNMA1Q12791 1236 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 STK4Q13043 487 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CUL4BQ13620 913 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 STK38Q15208 465 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 ISXQ2M1V0 245 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 FSCBQ5H9T9 825 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 COLEC12Q5KU26 742 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CEP135Q66GS9 1140 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 MSANTD2Q6P1R3 559 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 XKR5Q6UX68 686 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CCDC81Q6ZN84 652 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 TMC6Q7Z403 805 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CCDC117Q8IWD4 279 aaPredicted RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 SCML4Q8N228 414 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CARNMT1Q8N4J0 409 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 APOLD1Q96LR9 279 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 DDX50Q9BQ39 737 aaKnown RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.34□□□□□ -0.75
SYN3-204ENST00000441821 USP29Q9HBJ7 922 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CISHQ9NSE2 258 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 UCKL1Q9NWZ5 548 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 CHMP5Q9NZZ3 219 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 TJP2Q9UDY2 1190 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 SPTLC2O15270 562 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 POLR2DO15514 142 aaKnown RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 FFAR2O15552 330 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 RTN2O75298 545 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 NTRK1P04629 796 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 DUSP3P51452 185 aaPredicted RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 RPS24P62847 133 aaKnown RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 PPP3CAQ08209 521 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 ADIGQ0VDE8 80 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 NFATC3Q12968 1075 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 CUL4AQ13619 759 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 CDH18Q13634 790 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 ARL13BQ3SXY8 428 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 SGO2Q562F6 1265 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 RNF219Q5W0B1 726 aaPredicted RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 NADSYN1Q6IA69 706 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 SHC4Q6S5L8 630 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 MMS22LQ6ZRQ5 1243 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 SIX6OS1Q8N1H7 587 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 EXD3Q8N9H8 876 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 TMEM145Q8NBT3 493 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 KIAA0895Q8NCT3 520 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 KCTD13Q8WZ19 329 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 TATDN2Q93075 761 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 OSBPL2Q9H1P3 480 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 ZSCAN16Q9H4T2 348 aaPredicted RBP10.33□□□□□ -0.76
SYN3-204ENST00000441821 CNGB3Q9NQW8 809 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 EVA1BQ9NVM1 165 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 NLGN3Q9NZ94 848 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 SATB2Q9UPW6 733 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 CEP83Q9Y592 693 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 PCDHGA8Q9Y5G5 932 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 FLNCQ14315 2725 aa10.33□□□□□ -0.76
SYN3-204ENST00000441821 RELNP78509 3460 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 PTPN13Q12923 2485 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 NYNRINQ9P2P1 1898 aaKnown RBP10.32□□□□□ -0.76
SYN3-204ENST00000441821 LY6G6EA0A0G2JKS1 128 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 A0A1W2PNU3 283 aaPredicted RBP10.32□□□□□ -0.76
SYN3-204ENST00000441821 NEMP2A6NFY4 417 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 CDRT15L2A8MXV6 281 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 SCAMP1O15126 338 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 KLRC4O43908 158 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 CUTAO60888 179 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 PIAS2O75928 621 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
SYN3-204ENST00000441821 TRIM49P0CI25 452 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 TRIM49CP0CI26 452 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 THEGLP0DJG4 465 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 MYF5P13349 255 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 NNMTP40261 264 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 AFMP43652 599 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 METAP1P53582 386 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 TBX4P57082 545 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 DAOAP59103 153 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 BST2Q10589 180 aaKnown RBP10.32□□□□□ -0.76
SYN3-204ENST00000441821 GOLGA7BQ2TAP0 167 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 MS4A13Q5J8X5 152 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 C3orf38Q5JPI3 329 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 AGBL4Q5VU57 503 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 FAM46CQ5VWP2 391 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 DSG4Q86SJ6 1040 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 IFI44Q8TCB0 444 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 MAPK15Q8TD08 544 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 MYEOVQ96EZ4 313 aa10.32□□□□□ -0.76
SYN3-204ENST00000441821 IFT43Q96FT9 208 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms