RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 DACT3Q96B18 629 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CTHRC1Q96CG8 243 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 VPS50Q96JG6 964 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ADPGKQ9BRR6 497 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ELOVL1Q9BW60 279 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 HDHD5Q9BXW7 423 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 VPS33BQ9H267 617 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NDST4Q9H3R1 872 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 EPHX3Q9H6B9 360 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 SEC61A2Q9H9S3 476 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM36Q9NQ86 728 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MTMR4Q9NYA4 1195 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MPP6Q9NZW5 540 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF70Q9UC06 446 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 VPS4AQ9UN37 437 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 OSGIN2Q9Y236 505 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM237BA0A1B0GVD1 139 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 RTCAO00442 366 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 MUSKO15146 869 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 ADAM20O43506 726 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 RPS6KA4O75676 772 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 SEC14L2O76054 403 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 PDE8BO95263 885 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 METTL18O95568 372 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 SLC4A1P02730 911 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPP3CBP16298 524 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 HPDP32754 393 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 LIPAP38571 399 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 CLCN2P51788 898 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 UBASH3AP57075 661 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPP2CBP62714 309 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPP2CAP67775 309 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 ARHGAP8P85298 464 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 EFNB1P98172 346 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 GOLGA8FQ08AF8 430 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 C1orf141Q5JVX7 400 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 OGFOD2Q6N063 350 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 NCEH1Q6PIU2 408 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 CPLX2Q6PUV4 134 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 ARHGEF18Q6ZSZ5 1173 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 KDELC2Q7Z4H8 507 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 DNAJB7Q7Z6W7 309 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM132CQ8N3T6 1108 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 BEND2Q8NDZ0 799 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 N4BP2L2Q92802 583 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 JAKMIP2Q96AA8 810 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 R3HDM4Q96D70 268 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 RSPRY1Q96DX4 576 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 KLHL15Q96M94 604 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 C5orf34Q96MH7 638 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 WDFY2Q96P53 400 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 NPAS1Q99742 590 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 TSPY26PQ9H489 355 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 GOLGA2P5Q9HBQ8 144 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 ATP8A2Q9NTI2 1148 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 CHCHD3Q9NX63 227 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 KLQ9UEF7 1012 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 ITM2BQ9Y287 266 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM169AQ9Y6X4 670 aa4.35□□□□□ -1.71
CDC42BPA-207ENST00000441725 CYP3A7-CYP3A51PA0A087WV96 503 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 MYO1GB0I1T2 1018 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF213O14771 459 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 PMPCBO75439 489 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 KAT7O95251 611 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 IPO7O95373 1038 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 EIF2S1P05198 315 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 COX7A2P14406 83 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CD72P21854 359 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 MUTP22033 750 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 MMP8P22894 467 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CYP3A7P24462 503 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 HOXD10P28358 340 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 STIP1P31948 543 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 KIF5BP33176 963 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CTCFP49711 727 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 EIF3BP55884 814 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 DNASE1L3Q13609 305 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 PUM1Q14671 1186 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 NAIF1Q69YI7 327 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 GALNT17Q6IS24 598 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 WDR93Q6P2C0 686 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC105Q8IYK2 499 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF808Q8N4W9 903 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 LILRB1Q8NHL6 650 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 GABPB2Q8TAK5 448 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CNOT9Q92600 299 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 MNTQ99583 582 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 HEMGNQ9BXL5 484 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 SMARCAD1Q9H4L7 1026 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 SLC32A1Q9H598 525 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms