RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 GAD2Q05329 585 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 ILKQ13418 452 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 STARD3Q14849 445 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 ZBTB6Q15916 424 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 FAM153CQ494X1 144 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 SDHAF4Q5VUM1 108 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 RRAGBQ5VZM2 374 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 EGFLAMQ63HQ2 1017 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 KLHL10Q6JEL2 608 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 TAS1R3Q7RTX0 852 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 ARHGAP22Q7Z5H3 698 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 CROCCP2Q86T23 111 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 GATAD2AQ86YP4 633 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 GRAMD1CQ8IYS0 662 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 CACTIN-AS1Q8N1I8 211 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 EID2Q8N6I1 236 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 KIAA1958Q8N8K9 716 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 NAT16Q8N8M0 369 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 GBP7Q8N8V2 638 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-210ENST00000441703 TERB1Q8NA31 727 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 NELFBQ8WX92 580 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 CASKIN2Q8WXE0 1202 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 TNFRSF25Q93038 417 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 TLCD1Q96CP7 247 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 VCPIP1Q96JH7 1222 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 MRGPRX1Q96LB2 322 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 SENP8Q96LD8 212 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 XPO6Q96QU8 1125 aaKnown RBP6.72□□□□□ -1.33
HDAC6-210ENST00000441703 EDEM3Q9BZQ6 932 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 FAM129AQ9BZQ8 928 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 PLEKHA5Q9HAU0 1116 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 EPB41L5Q9HCM4 733 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 GCNT4Q9P109 453 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 ADAMTS1Q9UHI8 967 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 FAM153AQ9UHL3 310 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 DSEQ9UL01 958 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 NFU1Q9UMS0 254 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 CTNND2Q9UQB3 1225 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 PCDHA13Q9Y5I0 950 aa6.72□□□□□ -1.33
HDAC6-210ENST00000441703 LRRD1A4D1F6 860 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 C2orf78A6NCI8 922 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TULP1O00294 542 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 SCAMP3O14828 347 aaKnown RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 PAPSS1O43252 624 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 DIAPH2O60879 1101 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TOM1L1O75674 476 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 RNF8O76064 485 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 NOL4O94818 638 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 HEXIM1O94992 359 aaKnown RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 MT-CO3P00414 261 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 MUTP22033 750 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ELAVL4P26378 380 aaKnown RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 RPA1P27694 616 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ALDH3A1P30838 453 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 MATR3P43243 847 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 NPTX2P47972 431 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 LILRA4P59901 499 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TNNC1P63316 161 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TSPY1Q01534 308 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 GRIN1Q05586 938 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ORC1Q13415 861 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 GALNTL6Q49A17 601 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 LY6G5CQ5SRR4 150 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 THEMIS2Q5TEJ8 643 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 RHBDF2Q6PJF5 856 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 IRF2BP1Q8IU81 584 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 LMNTD2Q8IXW0 634 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 DCBLD1Q8N8Z6 715 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ERMNQ8TAM6 284 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 FAM81AQ8TBF8 368 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 LRRC15Q8TF66 581 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 SKA1Q96BD8 255 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 MYRFLQ96LU7 910 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ZNF317Q96PQ6 595 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ERGIC2Q96RQ1 377 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TSPAN18Q96SJ8 248 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 GORASP1Q9BQQ3 440 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 YIPF3Q9GZM5 350 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 TM9SF3Q9HD45 589 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 PANK4Q9NVE7 773 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 MAGEC2Q9UBF1 373 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 PLEKHB1Q9UF11 243 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 CNOT8Q9UFF9 292 aaKnown RBP6.71□□□□□ -1.34
HDAC6-210ENST00000441703 PCDHB1Q9Y5F3 818 aa6.71□□□□□ -1.34
HDAC6-210ENST00000441703 ITPR3Q14573 2671 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TP53BP1Q12888 1972 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 A0A1B0GTQ1 180 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CCDC169A6NNP5 214 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PPEF2O14830 753 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 YKT6O15498 198 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SMIM24O75264 130 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TULP3O75386 442 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PENKP01210 267 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MYL1P05976 194 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms