RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SOD2P04179 222 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 VIMP08670 466 aaKnown RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ALADP13716 330 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CREB1P16220 341 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 NFKB1P19838 968 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TUBP50607 506 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 NDST2P52849 883 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CREMQ03060 361 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TAF10Q12962 218 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ITIH4Q14624 930 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CRYMQ14894 314 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 PIK3R6Q5UE93 754 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 KIAA1841Q6NSI8 718 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CASC4Q6P4E1 433 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 RGS9BPQ6ZS82 235 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 C4orf33Q8N1A6 199 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 PPM1NQ8N819 430 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 DPF3Q92784 378 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CELF6Q96J87 481 aaKnown RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TGS1Q96RS0 853 aaKnown RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ZYG11BQ9C0D3 744 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CWH43Q9H720 699 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 CASS4Q9NQ75 786 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 BFARQ9NZS9 450 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 VANGL2Q9ULK5 521 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 AAR2Q9Y312 384 aaKnown RBP13.48□□□□□ -0.25
CPSF4-206ENST00000441580 NYNRINQ9P2P1 1898 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 GOLGA6L7A0A1B0GV03 622 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 ZBTB24O43167 697 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 CACNG3O60359 315 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 NEBLO76041 1014 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 ASMTLO95671 621 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 POLBP06746 335 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 CSH1P0DML2 217 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 CSH2P0DML3 217 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 ATF6P18850 670 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 KRT4P19013 534 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MGAT1P26572 445 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PPM1AP35813 382 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PBX3P40426 434 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 CCNFP41002 786 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MAPKAPK2P49137 400 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PGFP49763 221 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 GEMP55040 296 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SESN2P58004 480 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 DNAJC3Q13217 504 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 LRRC14Q15048 493 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MS4A13Q5J8X5 152 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 FOXR1Q6PIV2 292 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 TP53INP2Q8IXH6 220 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 GPR65Q8IYL9 337 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 CCDC197Q8NCU1 140 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 ARMC5Q96C12 935 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MRRFQ96E11 262 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 IL12RB2Q99665 862 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 GORASP1Q9BQQ3 440 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
CPSF4-206ENST00000441580 PLAC1Q9HBJ0 212 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
CPSF4-206ENST00000441580 SHROOM3Q8TF72 1996 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 SLC12A8A0AV02 714 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 F5H423 210 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 MATN3O15232 486 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 TLR5O60602 858 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 BAIAP3O94812 1187 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 URODP06132 367 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CCNB1P14635 433 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CD68P34810 354 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 DSG1Q02413 1049 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 MGAT5Q09328 741 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CDH17Q12864 832 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 DUSP4Q13115 394 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 VEPH1Q14D04 833 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 PDK4Q16654 411 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms