RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RNF11Q9Y3C5 154 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 H7C0C1 242 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 GPR25O00155 361 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 H6PDO95479 791 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ZBED1O96006 694 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CCDC130P13994 396 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 ARL2P36404 184 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ATP5OP48047 213 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 NUMBP49757 651 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 PSMD7P51665 324 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 THOP1P52888 689 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CCNA1P78396 465 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 C16orf72Q14CZ0 275 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ACAP1Q15027 740 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CYTH1Q15438 398 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 SURF1Q15526 300 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 TARBP2Q15633 366 aaKnown RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 PIGGQ5H8A4 983 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 NPNTQ6UXI9 565 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 KYQ8NBH2 561 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 DEPDC1BQ8WUY9 529 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 RTP4Q96DX8 246 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 COX4I2Q96KJ9 171 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 LENG8Q96PV6 779 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 EBNA1BP2Q99848 306 aaKnown RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 YIPF2Q9BWQ6 316 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 PACSIN3Q9UKS6 424 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 A0A1B0GTW7 788 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 AIM2O14862 343 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 SERPINB7O75635 380 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ALDH2P05091 517 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 ARRB2P32121 409 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CLCN3P51790 818 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 NAA20P61599 178 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 PFKPQ01813 784 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 RELAQ04206 551 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CRHR2Q13324 411 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CAPSQ13938 189 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CCL14Q16627 93 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ELMSAN1Q6PJG2 1045 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ZPBP2Q6X784 338 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CYS1Q717R9 158 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CDRT15Q96T59 188 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 PARK7Q99497 189 aaKnown RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 NIFKQ9BYG3 293 aaKnown RBP12.16□□□□□ -0.46
LTBR-203ENST00000441074 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 VPS45Q9NRW7 570 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 RNF186Q9NXI6 227 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
LTBR-203ENST00000441074 TRIM43BA6NCK2 446 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 H3BNH8 94 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MED7O43513 233 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 E2F6O75461 281 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 RALBP11234 206 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MAGEA3P43357 314 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 NUDT2P50583 147 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 ARHGAP1Q07960 439 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 DPYSQ14117 519 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 FAXCQ5TGI0 409 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 DSELQ8IZU8 1212 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 TMEM130Q8N3G9 435 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 SHCBP1Q8NEM2 672 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 HSPH1Q92598 858 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 LHX5Q9H2C1 402 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 COG4Q9H9E3 785 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 PCSK1NQ9UHG2 260 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MYRFQ9Y2G1 1151 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 KAT6AQ92794 2004 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MCM3APO60318 1980 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 RGSL1A5PLK6 1076 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 ZNF701M0R085 212 aaPredicted RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 MATN2O00339 956 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms