RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 TCEAL4Q96EI5 215 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 C9orf72Q96LT7 481 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 SAMD11Q96NU1 681 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 SAYSD1Q9NPB0 183 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 ZNF212Q9UDV6 495 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 AGO1Q9UL18 857 aaKnown RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 NOTCH4Q99466 2003 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 EPOPA6NHQ4 379 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 ACSL3O95573 720 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 CKMP06732 381 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 APRTP07741 180 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 MSS51Q4VC12 460 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 FNBP1LQ5T0N5 605 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 AFMIDQ63HM1 303 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 HOOK3Q86VS8 718 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 CCDC13Q8IYE1 715 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 USP33Q8TEY7 942 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 ZNF419Q96HQ0 510 aaPredicted RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 PKNOX2Q96KN3 472 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 GDF15Q99988 308 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 SMG9Q9H0W8 520 aaKnown RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 PABPC3Q9H361 631 aaKnown RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 ACBD3Q9H3P7 528 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 KLHL8Q9P2G9 620 aaPredicted RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 HCFC2Q9Y5Z7 792 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 HELZP42694 1942 aaKnown RBP19.57■□□□□ 0.72
SNX17-203ENST00000440760 DRGXA6NNA5 263 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 RIPK2O43353 540 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 TSPAN3O60637 253 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 STK10O94804 968 aaKnown RBP19.56■□□□□ 0.72
SNX17-203ENST00000440760 SHBGP04278 402 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 PSMB4P28070 264 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 PAPOLAP51003 745 aaKnown RBP19.56■□□□□ 0.72
SNX17-203ENST00000440760 RPS24P62847 133 aaKnown RBP19.56■□□□□ 0.72
SNX17-203ENST00000440760 HIF1AQ16665 826 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 HMCESQ96FZ2 354 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 GCNAQ96QF7 691 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 RUFY1Q96T51 708 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 NINJ2Q9NZG7 142 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 DNMT3BQ9UBC3 853 aaKnown RBP19.56■□□□□ 0.72
SNX17-203ENST00000440760 ZFP37Q9Y6Q3 630 aaPredicted RBP19.56■□□□□ 0.72
SNX17-203ENST00000440760 MYO9BQ13459 2157 aa19.56■□□□□ 0.72
SNX17-203ENST00000440760 H0YGN5 161 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 CHADO15335 359 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 MAFKO60675 156 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 OPHN1O60890 802 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 CDC25CP30307 473 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 NTHL1P78549 312 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 SLC29A2Q14542 456 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 ALS2CLQ60I27 953 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 LZTR1Q8N653 840 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 SHKBP1Q8TBC3 707 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 AGAP3Q96P47 875 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 FERMT1Q9BQL6 677 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 NFS1Q9Y697 457 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 CLUHO75153 1309 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 SYF2O95926 243 aaKnown RBP19.55■□□□□ 0.72
SNX17-203ENST00000440760 PDIA2Q13087 525 aaKnown RBP19.55■□□□□ 0.72
SNX17-203ENST00000440760 KYNUQ16719 465 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 SLC5A9Q2M3M2 681 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 DENND2CQ68D51 928 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 PID1Q7Z2X4 250 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 UMODL1-AS1Q8N2C9 162 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.55■□□□□ 0.72
SNX17-203ENST00000440760 WDR83Q9BRX9 315 aaKnown RBP19.55■□□□□ 0.72
SNX17-203ENST00000440760 REV3LO60673 3130 aa19.55■□□□□ 0.72
SNX17-203ENST00000440760 NDC80O14777 642 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 AVILO75366 819 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 OAS2P29728 719 aaKnown RBP19.54■□□□□ 0.72
SNX17-203ENST00000440760 CAPN12Q6ZSI9 719 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 ANKMY2Q8IV38 441 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 ZSCAN18Q8TBC5 510 aaPredicted RBP19.54■□□□□ 0.72
SNX17-203ENST00000440760 GORASP1Q9BQQ3 440 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 BRD8Q9H0E9 1235 aa19.54■□□□□ 0.72
SNX17-203ENST00000440760 RASA4BC9J798 803 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 ZBTB24O43167 697 aaPredicted RBP19.53■□□□□ 0.72
SNX17-203ENST00000440760 RASA4O43374 803 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 GREM1O60565 184 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 JCHAINP01591 159 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 RHOP08100 348 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 OR1E1P30953 314 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 CD68P34810 354 aaPredicted RBP19.53■□□□□ 0.72
SNX17-203ENST00000440760 MAGEA4P43358 317 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 ZNF844Q08AG5 666 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 SEMA5AQ13591 1074 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 TEAD2Q15562 447 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 CEP85LQ5SZL2 805 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 ZNF354CQ86Y25 554 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 KRT222Q8N1A0 295 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 OR52K2Q8NGK3 314 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 SLC46A2Q9BY10 475 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 FOXP3Q9BZS1 431 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 TSPYL1Q9H0U9 437 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 OGFRQ9NZT2 677 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 TTLL3Q9Y4R7 772 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.53■□□□□ 0.72
SNX17-203ENST00000440760 TRAV19A0A0A6YYK7 116 aa19.53■□□□□ 0.72
SNX17-203ENST00000440760 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.53■□□□□ 0.72
SNX17-203ENST00000440760 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms