RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TCRBV7S3A2A0A539 114 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MEIS3P2A8K0S8 358 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 TCP11X1B4DZS4 312 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 RNF103O00237 685 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CLDN5O00501 218 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MGEA5O60502 916 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ATP2C2O75185 946 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 B3GAT3O94766 335 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 NCAM1P13591 858 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 SSTR1P30872 391 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ADRA1BP35368 520 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CCNFP41002 786 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CXCR3P49682 368 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 PPIDQ08752 370 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CCDC15Q0P6D6 951 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 IFT88Q13099 833 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 DNAJC3Q13217 504 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MTA1Q13330 715 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ADAM15Q13444 863 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 FRG1Q14331 258 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 SPDYAQ5MJ70 313 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ANKRD20A2Q5SQ80 823 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ANKRD20A1Q5TYW2 823 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ANKRD20A3Q5VUR7 823 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 KIAA0319Q5VV43 1072 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 FYB2Q5VWT5 728 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CAPN12Q6ZSI9 719 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MARK2Q7KZI7 788 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 TRIM42Q8IWZ5 723 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CYP4X1Q8N118 509 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CCDC110Q8TBZ0 833 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ZNF398Q8TD17 642 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MGARPQ8TDB4 240 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MZB1Q8WU39 189 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CDKL2Q92772 493 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 EBNA1BP2Q99848 306 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 IQCGQ9H095 443 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 SMOC2Q9H3U7 446 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 WDR6Q9NNW5 1121 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 RGS18Q9NS28 235 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 PIGVQ9NUD9 493 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 DDIT4Q9NX09 232 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 CLEC1BQ9P126 229 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 FBXW11Q9UKB1 542 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 TRHDEQ9UKU6 1024 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 ARL2BPQ9Y2Y0 163 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
HDAC6-209ENST00000440653 OTOGLQ3ZCN5 2332 aa9.38□□□□□ -0.91
HDAC6-209ENST00000440653 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 DCDC2BA2VCK2 349 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 FAM159BA6NKW6 160 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 YJEFN3A6XGL0 299 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 E7ENQ6 273 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 H0YHG0 523 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 SYN3O14994 580 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 TRIM66O15016 1216 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 IRAK2O43187 625 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 HOXA2O43364 376 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 BEST1O76090 585 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 IL1BP01584 269 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 IGLV3-25P01717 112 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 MT-ND3P03897 115 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ADRB1P08588 477 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 VAV1P15498 845 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 PGAM1P18669 254 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 AMPD1P23109 780 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 HOXC13P31276 330 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 NRG1Q02297 640 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ACTN3Q08043 901 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 DSC1Q08554 894 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 GALNT2Q10471 571 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 NME3Q13232 169 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC14Q15048 493 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 PARP6Q2NL67 630 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 KBTBD12Q3ZCT8 623 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC8BQ6P9F7 803 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 CNKSR3Q6P9H4 555 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 SLC24A5Q71RS6 500 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ZNF534Q76KX8 674 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms