RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FYB2Q5VWT5 728 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 BTBD8Q5XKL5 378 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 RWDD4Q6NW29 188 aaKnown RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TDRPQ86YL5 185 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 CCNJLQ8IV13 435 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TP53INP2Q8IXH6 220 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SLAIN1Q8ND83 568 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 RFWD2Q8NHY2 731 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 LINC01599Q8WXQ3 324 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 EZH1Q92800 747 aaPredicted RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 BTBD10Q9BSF8 475 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TSEN34Q9BSV6 310 aaKnown RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 OR12D3Q9UGF7 316 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TEX264Q9Y6I9 313 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 A0A0A0MRY4 1105 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 A0A1W2PPM1 405 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 GSC2O15499 205 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 CCDC22O60826 627 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 PSMG1O95456 288 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 AMHP03971 560 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 KCNA4P22459 653 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 APLP1P51693 650 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 OVGP1Q12889 678 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SDHAF4Q5VUM1 108 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 LVRNQ6Q4G3 990 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 C4orf22Q6V702 233 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 PDZD4Q76G19 769 aaPredicted RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TAC4Q86UU9 113 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 COLGALT1Q8NBJ5 622 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SPATA13Q96N96 652 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 PPCSQ9HAB8 311 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 RRN3Q9NYV6 651 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 WDR91A4D1P6 747 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 HACD1B0YJ81 288 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 I6L893 689 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 SLC18A1P54219 525 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PID1Q7Z2X4 250 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 CAND1Q86VP6 1230 aaKnown RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PDCD7Q8N8D1 485 aaKnown RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 DBF4BQ8NFT6 615 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 B4GALNT2Q8NHY0 566 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 GATA6Q92908 595 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 OLFM3Q96PB7 478 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 KLF6Q99612 283 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 KLHL8Q9P2G9 620 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PCDHB8Q9UN66 801 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 TRIM17Q9Y577 477 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 MRPL42Q9Y6G3 142 aaKnown RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 MAGEA13PA6NCF6 341 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 TYROBPO43914 113 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 DGKIO75912 1065 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 SELPP16109 830 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 TYMPP19971 482 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 GRIA1P42261 906 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 SERPINB4P48594 390 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 TRAF7Q6Q0C0 670 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 BNIPLQ7Z465 357 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PPM1NQ8N819 430 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 WDR60Q8WVS4 1066 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PTCD3Q96EY7 689 aaKnown RBP14.5□□□□□ -0.09
LIMD1-202ENST00000440097 LRFN2Q9ULH4 789 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PCDHB7Q9Y5E2 793 aa14.5□□□□□ -0.09
LIMD1-202ENST00000440097 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 GYG2O15488 501 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 FKTNO75072 461 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 HAUS5O94927 633 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 AIF1P55008 147 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 DPYSQ14117 519 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 ARHGEF6Q15052 776 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 ZRSR2Q15696 482 aaKnown RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 ARMC3Q5W041 872 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 BHLHA9Q7RTU4 235 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 ARHGAP22Q7Z5H3 698 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 KBTBD2Q8IY47 623 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 CFAP61Q8NHU2 1237 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 DEPDC1BQ8WUY9 529 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 IRGQQ8WZA9 623 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 MCUR1Q96AQ8 359 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 B3GALT6Q96L58 329 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 GBP5Q96PP8 586 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 TRIM56Q9BRZ2 755 aaKnown RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 FTHL17Q9BXU8 183 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 SENP1Q9P0U3 644 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 SFMBT1Q9UHJ3 866 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 A0A0G2JND7 137 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 MSI1O43347 362 aaKnown RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 PQBP1O60828 265 aaKnown RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 ZWINTO95229 277 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 MOCS2O96007 188 aaPredicted RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 GNRH1P01148 92 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 UBTFL6P0CB48 400 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms