RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 PAQR9Q6ZVX9 377 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 KDELC2Q7Z4H8 507 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 GORASP1Q9BQQ3 440 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CITO14578 2027 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 F8W8V4 182 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 MLNP12872 115 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 NCAM1P13591 858 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 SERPINB6P35237 376 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 TAF6P49848 677 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ASPHQ12797 758 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 OR52E8Q6IFG1 317 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 GPRIN1Q7Z2K8 1008 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 RAB3IL1Q8TBN0 382 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 OR52B2Q96RD2 323 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ULBP1Q9BZM6 244 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 KATNBL1Q9H079 304 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 IARS2Q9NSE4 1012 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 C20orf96Q9NUD7 363 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 LOC285556D6RIA3 1793 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 HACD1B0YJ81 288 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 PDHXO00330 501 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF195O14628 629 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 PHGDHO43175 533 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 USP17L7P0C7H9 530 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 SMIM10L2AP0DMW4 78 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 SMIM10L2BP0DMW5 78 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ACADSBP45954 432 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 GRIK3Q13003 919 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 CBLBQ13191 982 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 CLEC20AQ6ZU45 233 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 VCXQ9H320 206 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 SLC39A10Q9ULF5 831 aa13.86□□□□□ -0.19
HERPUD1-204ENST00000439977 A0A0G2JMZ2 1700 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TREHO43280 583 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 FYNP06241 537 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 NPR3P17342 541 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 PTPN1P18031 435 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 NOS2P35228 1153 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 PSEN1P49768 467 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 DSG1Q02413 1049 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 CDC16Q13042 620 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ZBTB17Q13105 803 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 FOXB2Q5VYV0 432 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ACMSDQ8TDX5 336 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF483Q8TF39 744 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TNIP3Q96KP6 325 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 NPY6RQ99463 290 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 FERMT1Q9BQL6 677 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 EBF3Q9H4W6 596 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 DDIT4Q9NX09 232 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF487B1APH4 448 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TK2O00142 265 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 AIM2O14862 343 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 C2P06681 752 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ADRA1BP35368 520 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 GLUD2P49448 558 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TPI1P60174 286 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF460Q14592 562 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 RNF148Q8N7C7 305 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 PNPLA1Q8N8W4 532 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 WNT8BQ93098 351 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 MARK4Q96L34 752 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 ECSITQ9BQ95 431 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 BFARQ9NZS9 450 aa13.85□□□□□ -0.19
HERPUD1-204ENST00000439977 KLHL2O95198 593 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 JCHAINP01591 159 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 NFKB1P19838 968 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 MX2P20592 715 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 EPHA3P29320 983 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 CD68P34810 354 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 POLE2P56282 527 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 ANKRD20A4Q4UJ75 823 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 PPM1LQ5SGD2 360 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 CYS1Q717R9 158 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 GATA6Q92908 595 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 APBA2Q99767 749 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 GTF2IRD1Q9UHL9 959 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 CDH22Q9UJ99 828 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 ADAMTS6Q9UKP5 1117 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 STAP1Q9ULZ2 295 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 DERAQ9Y315 318 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 ZCWPW2A0A1B0GU75 182 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 MYBPHLA2RUH7 354 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 DCLK1O15075 740 aa13.84□□□□□ -0.19
HERPUD1-204ENST00000439977 CD4P01730 458 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms