RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NR1H2P55055 460 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 B4GALNT1Q00973 533 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 TRPC3Q13507 836 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 LARS2Q15031 903 aaKnown RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 DAZAP2Q15038 168 aaPredicted RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 TRIP6Q15654 476 aaKnown RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 CTXN3Q4LDR2 81 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 MAP3K21Q5TCX8 1036 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 ATG16L1Q676U5 607 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 MTFR2Q6P444 385 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 SHC4Q6S5L8 630 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 RANBP10Q6VN20 620 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 BBS12Q6ZW61 710 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 RNF144BQ7Z419 303 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 EXD3Q8N9H8 876 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 MPP4Q96JB8 637 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 ZNF347Q96SE7 839 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 GATA5Q9BWX5 397 aaPredicted RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 GPR63Q9BZJ6 419 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 CTDSP1Q9GZU7 261 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 NUAK2Q9H093 628 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 ACAD9Q9H845 621 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 WASH6PQ9NQA3 447 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS41-207ENST00000439468 THAP1Q9NVV9 213 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 PI4KBQ9UBF8 816 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 HSF4Q9ULV5 492 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 TTC34A8MYJ7 566 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 E5RJQ4 531 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 J3KRW8 73 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 DHX16O60231 1041 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 SLC3A2P08195 630 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 ARSAP15289 507 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 IGFBP2P18065 325 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 CD72P21854 359 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 PRPH2P23942 346 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 TLE2Q04725 743 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ZNF91Q05481 1191 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 MAPK7Q13164 816 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ANKRD1Q15327 319 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ARL13AQ5H913 290 aaPredicted RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 CBWD5Q5RIA9 395 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 SH2D4BQ5SQS7 431 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 INTS11Q5TA45 600 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 RETSATQ6NUM9 610 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 DHRS13Q6UX07 377 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 RFX6Q8HWS3 928 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 RHPN2Q8IUC4 686 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 SRFBP1Q8NEF9 429 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 PNISRQ8TF01 805 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 C2CD4CQ8TF44 421 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 IP6K1Q92551 441 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ZBTB9Q96C00 473 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ZNF845Q96IR2 970 aaPredicted RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 SEC62Q99442 399 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 ABHD14AQ9BUJ0 271 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 PHF7Q9BWX1 381 aaPredicted RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 TM2D2Q9BX73 214 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 TTYH1Q9H313 450 aaPredicted RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 STN1Q9H668 368 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 GAR1Q9NY12 217 aaKnown RBP3.88□□□□□ -1.79
VPS41-207ENST00000439468 KLQ9UEF7 1012 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 FBXO4Q9UKT5 387 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 MAFFQ9ULX9 164 aa3.88□□□□□ -1.79
VPS41-207ENST00000439468 ABCC9O60706 1549 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 PEX12O00623 359 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 SEPT4O43236 478 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 HNRNPRO43390 633 aaKnown RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 EPB41L2O43491 1005 aaKnown RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 CNTN5O94779 1100 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 CD4P01730 458 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 CYP19A1P11511 503 aaPredicted RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 ST6GAL1P15907 406 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 PNPLA4P41247 253 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 DMWDQ09019 674 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 PFKFB3Q16875 520 aaPredicted RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 WDR45BQ5MNZ6 344 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 TMEM63BQ5T3F8 832 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 ANO7Q6IWH7 933 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 TMEM200AQ86VY9 491 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 ANKRD44Q8N8A2 993 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 NAXEQ8NCW5 288 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 FAM110DQ8TAY7 271 aaPredicted RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 MAP4K1Q92918 833 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 ZBTB10Q96DT7 871 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 RNFT2Q96EX2 444 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 HMCESQ96FZ2 354 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 ADAD1Q96M93 576 aaKnown RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 PPM1MQ96MI6 270 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 PPP1R10Q96QC0 940 aaKnown RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 HTATIP2Q9BUP3 242 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 SLC26A6Q9BXS9 759 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 TRIM31Q9BZY9 425 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 PAIP1Q9H074 479 aaKnown RBP3.87□□□□□ -1.79
VPS41-207ENST00000439468 SFXN1Q9H9B4 322 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 UBN1Q9NPG3 1134 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 RASSF1Q9NS23 344 aa3.87□□□□□ -1.79
VPS41-207ENST00000439468 ARL8BQ9NVJ2 186 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms