RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC22A23A1A5C7 686 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRR23AA6NEV1 266 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 C16orf96A6NNT2 1141 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRPF3O43395 683 aaKnown RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SYF2O95926 243 aaKnown RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 MBPP02686 304 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 TMIGD3P0DMS9 266 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 U2AF1L5P0DN76 240 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 RPS6KB1P23443 525 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 HOXA7P31268 230 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 HTR7P34969 479 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 CACNB3P54284 484 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC12A2P55011 1212 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 U2AF1Q01081 240 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 DNASE1L3Q13609 305 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRTGQ2VWP7 1150 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 MANEALQ5VSG8 457 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 CXorf57Q6NSI4 855 aaKnown RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 ADHFE1Q8IWW8 467 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 FSTL5Q8N475 847 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 RBMXL3Q8N7X1 1067 aaKnown RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 PIGKQ92643 395 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 P2RY11Q96G91 374 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRR11Q96HE9 360 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZPBPQ9BS86 351 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 TUBB6Q9BUF5 446 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SELENOOQ9BVL4 669 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 LRRC27Q9C0I9 530 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SAP30LQ9HAJ7 183 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 C1orf112Q9NSG2 853 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF112Q9UJU3 913 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 OGDHLQ9ULD0 1010 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZMYND8Q9ULU4 1186 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 CAPN11Q9UMQ6 739 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 HPSEQ9Y251 543 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 DNHD1Q96M86 4753 aa3.4□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLIT3O75094 1523 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 RIMS2Q9UQ26 1411 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 ANKRD62A6NC57 917 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 EIF4E1BA6NMX2 242 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 LACTBL1A8MY62 500 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF814B7Z6K7 855 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRSS44E7EML9 344 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 F8W810 466 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 CTIFO43310 598 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 WDR47O94967 919 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 EPN2O95208 641 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 MAP4K4O95819 1239 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 MYF5P13349 255 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 ALDH7A1P49419 539 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 CARSP49589 748 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 HUNKP57058 714 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 RAE1P78406 368 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 MTAPQ13126 283 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 MTA1Q13330 715 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 IDI1Q13907 227 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 AAK1Q2M2I8 961 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 RNF220Q5VTB9 566 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 RBM44Q6ZP01 1051 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 UNC13DQ70J99 1090 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 SESTD1Q86VW0 696 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 ADSSL1Q8N142 457 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 KRT78Q8N1N4 520 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 B4GALNT2Q8NHY0 566 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 IPCEF1Q8WWN9 437 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 LRTOMTQ8WZ04 291 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 APIPQ96GX9 242 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 FAM227BQ96M60 508 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 TTYH1Q9H313 450 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 FAM204AQ9H8W3 233 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 MRPL44Q9H9J2 332 aaKnown RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF287Q9HBT7 754 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 DECR2Q9NUI1 292 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 COG5Q9UP83 839 aa3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 HEMK1Q9Y5R4 338 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 EP300Q09472 2414 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P18-201ENST00000438801 NBEAL1Q6ZS30 2694 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 JMJD1CQ15652 2540 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 LRRK2Q5S007 2527 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZFYVE9O95405 1425 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 MYO5BQ9ULV0 1848 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 TMEM272A0A1B0GTI8 110 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 A6NNZ2 444 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 NDUFB8O95169 186 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 TGFB3P10600 412 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 ST6GAL1P15907 406 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 CDC25AP30304 524 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 POLD3Q15054 466 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 CNGA3Q16281 694 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 KRTAP21-3Q3LHN1 58 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 MINDY4Q4G0A6 757 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF585BQ52M93 769 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 RFX8Q6ZV50 586 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 B4GALNT4Q76KP1 1039 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC44A5Q8NCS7 719 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 MBD3L2Q8NHZ7 208 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms