RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DRGXA6NNA5 263 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 C7P10643 843 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 GZMAP12544 262 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 PTGER3P43115 390 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 TPMTP51580 245 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 IRAK1P51617 712 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 DCUN1D2Q6PH85 259 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 ARMCX6Q7L4S7 300 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF571Q7Z3V5 609 aaPredicted RBP25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 SETD3Q86TU7 594 aaPredicted RBP25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 NETO1Q8TDF5 533 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 PIGKQ92643 395 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 MCEEQ96PE7 176 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 FEM1AQ9BSK4 669 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 TSPY26PQ9H489 355 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 VPS28Q9UK41 221 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 SNX10Q9Y5X0 201 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 BZW2Q9Y6E2 419 aaKnown RBP25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 CEP250Q9BV73 2442 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 EDDM13A0A1B0GTR0 161 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 TCRBV5S1A1TA0A578 114 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 TARSL2A2RTX5 802 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 TMCO5BA8MYB1 307 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 RNASEH1O60930 286 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 SRGAP2O75044 1071 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 CNTN5O94779 1100 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 IGLV3-19P01714 112 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 RHOCP08134 193 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 RRM1P23921 792 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 ADRA1BP35368 520 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 HOXD12P35452 270 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 CTSOP43234 321 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF143P52747 638 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 PUM1Q14671 1186 aaKnown RBP eCLIP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 SF3A2Q15428 464 aaKnown RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 RSPO4Q2I0M5 234 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 ALFQ53S48 1182 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 C6orf118Q5T5N4 469 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 E4F1Q66K89 784 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF776Q68DI1 518 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 LRSAM1Q6UWE0 723 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 CACUL1Q86Y37 369 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 SYT12Q8IV01 421 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 SYN2Q92777 582 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 FOXJ1Q92949 421 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 RMDN1Q96DB5 314 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 MUC3BQ9H195 1237 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 TMPRSS4Q9NRS4 437 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 WSB2Q9NYS7 404 aaPredicted RBP25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 TAS2R14Q9NYV8 317 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 SLC25A13Q9UJS0 675 aa25.43■■□□□ 1.66
RAPGEF1-206ENST00000438647 DNTTP04053 509 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 VASPP50552 380 aaPredicted RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 HDAC4P56524 1084 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 NRG1Q02297 640 aaPredicted RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF33AQ06730 810 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 TTC31Q49AM3 519 aaPredicted RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 SH3PXD2AQ5TCZ1 1133 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 TOE1Q96GM8 510 aaKnown RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 RPL10LQ96L21 214 aaKnown RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZYG11BQ9C0D3 744 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 CD93Q9NPY3 652 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 PARVAQ9NVD7 372 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 DLL3Q9NYJ7 618 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 PPARGC1AQ9UBK2 798 aaKnown RBP25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 SCML1Q9UN30 329 aa25.42■■□□□ 1.66
RAPGEF1-206ENST00000438647 NUP205Q92621 2012 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 KHNYNO15037 678 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 SIN3BO75182 1162 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 KRT83P78385 493 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZBED6P86452 979 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 SFSWAPQ12872 951 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 TDRD12Q587J7 1177 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 PPP1R15BQ5SWA1 713 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 VPS36Q86VN1 386 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 NTAN1Q96AB6 310 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 ALG14Q96F25 216 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 CNPY3Q9BT09 278 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 C2orf49Q9BVC5 232 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 OSBPL2Q9H1P3 480 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 RSPH9Q9H1X1 276 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 SMOC1Q9H4F8 434 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 RETREG1Q9H6L5 497 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 MPP6Q9NZW5 540 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 OR12D3Q9UGF7 316 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 SLCO3A1Q9UIG8 710 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 CAPN11Q9UMQ6 739 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 LUC7L2Q9Y383 392 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 OR51B4Q9Y5P0 310 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 DCHS1Q96JQ0 3298 aa25.41■■□□□ 1.66
RAPGEF1-206ENST00000438647 TTC34A8MYJ7 566 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 CBFA2T2O43439 604 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 OR1E1P30953 314 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 STK19P49842 368 aaPredicted RBP25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 RPS14P62263 151 aaKnown RBP25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 RPL7AP62424 266 aaKnown RBP25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 SYCP2LQ5T4T6 812 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF783Q6ZMS7 281 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 RABEPKQ7Z6M1 372 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms