RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 YJEFN3A6XGL0 299 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 NRP1O14786 923 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 ADRA1BP35368 520 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 GJA5P36382 358 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 IRF9Q00978 393 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 SNX17Q15036 470 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 EML3Q32P44 896 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
TTC3-209ENST00000438055 SHKBP1Q8TBC3 707 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 CMTM5Q96DZ9 223 aa17.12■□□□□ 0.33
TTC3-209ENST00000438055 FCRL3Q96P31 734 aaPredicted RBP17.12■□□□□ 0.33
TTC3-209ENST00000438055 DAB1O75553 588 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 IDH3AP50213 366 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 DSG1Q02413 1049 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 SEPT6Q14141 434 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 RNF220Q5VTB9 566 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 FSTL4Q6MZW2 842 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 KCNMB4Q86W47 210 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 RAB3IL1Q8TBN0 382 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 APBA2Q99767 749 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 ADAMTS10Q9H324 1103 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 WDCPQ9H6R7 721 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 LCTP09848 1927 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 PRPSAP1Q14558 356 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 TRIP10Q15642 601 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 SPANXN3Q5MJ09 141 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 GRTP1Q5TC63 336 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 IPPQ9Y573 584 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 CDY2AQ9Y6F7 541 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
TTC3-209ENST00000438055 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 PTPN3P26045 913 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 EPHX2P34913 555 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 FSCBQ5H9T9 825 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 C9orf131Q5VYM1 1079 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 EPAS1Q99814 870 aa17.11■□□□□ 0.33
TTC3-209ENST00000438055 WDR55Q9H6Y2 383 aaPredicted RBP17.11■□□□□ 0.33
TTC3-209ENST00000438055 SORBS2O94875 1100 aaKnown RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 IL1BP01584 269 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 LINGO3P0C6S8 592 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 IGFBP6P24592 240 aaPredicted RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 NUMBP49757 651 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 TIFABQ6ZNK6 161 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 PHTF2Q8N3S3 785 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 SPATA6LQ8N4H0 392 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ZNF778Q96MU6 729 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 COG4Q9H9E3 785 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 MKS1Q9NXB0 559 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 PIRO00625 290 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 C2P06681 752 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.339e-7■■□□□ 11.8
TTC3-209ENST00000438055 RAP1GDS1P52306 607 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ACTR3P61158 418 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 POU6F1Q14863 301 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ANKRD20A4Q4UJ75 823 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 CLEC20AQ6ZU45 233 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 TDRD5Q8NAT2 981 aaKnown RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 MAML3Q96JK9 1138 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 SENP8Q96LD8 212 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 NMRAL1Q9HBL8 299 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 STRNO43815 780 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 NUDT2P50583 147 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 TBL3Q12788 808 aaKnown RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 MFSD10Q14728 455 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 MAMDC4Q6UXC1 1216 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 HPS6Q86YV9 775 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 RNF148Q8N7C7 305 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 GAD1Q99259 594 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 TKTL2Q9H0I9 626 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 ATXN3LQ9H3M9 355 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
TTC3-209ENST00000438055 SPATS2LQ9NUQ6 558 aaKnown RBP17.1■□□□□ 0.33
TTC3-209ENST00000438055 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
TTC3-209ENST00000438055 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 ISLR2Q6UXK2 745 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 HNRNPABQ99729 332 aaKnown RBP17.09■□□□□ 0.33
TTC3-209ENST00000438055 RHOBTB2Q9BYZ6 727 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 OR12D3Q9UGF7 316 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 CITO14578 2027 aa17.09■□□□□ 0.33
TTC3-209ENST00000438055 MYBPHLA2RUH7 354 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms