RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OXNAD1Q96HP4 312 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 SERAC1Q96JX3 654 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 PGLYRP2Q96PD5 576 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 GORASP1Q9BQQ3 440 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 CLIC5Q9NZA1 410 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 MYO16Q9Y6X6 1858 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 CNTFP26441 200 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 YWHAQP27348 245 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 MLLT6P55198 1093 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-216ENST00000437340 SESN2P58004 480 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-216ENST00000437340 ARTNQ5T4W7 220 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 DEFB128Q7Z7B8 93 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 LRRC49Q8IUZ0 686 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 ARHGAP12Q8IWW6 846 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 DEPDC1BQ8WUY9 529 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 CDKL2Q92772 493 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 CELF6Q96J87 481 aaKnown RBP26.31■■□□□ 1.8
CPNE1-216ENST00000437340 SPATA17Q96L03 361 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 KDM4CQ9H3R0 1056 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 GRID1Q9ULK0 1009 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 ALPK3Q96L96 1907 aa26.31■■□□□ 1.8
CPNE1-216ENST00000437340 MTMR11A4FU01 709 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 WASH4PA8MWX3 477 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 TRIM49D1C9J1S8 452 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 PSMD3O43242 534 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 LPXNO60711 386 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CSH1P0DML2 217 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CSH2P0DML3 217 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 ALADP13716 330 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CPB1P15086 417 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 NEK3P51956 506 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 USP46P62068 366 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 ANKS3Q6ZW76 656 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 MARK2Q7KZI7 788 aaKnown RBP26.3■■□□□ 1.8
CPNE1-216ENST00000437340 SPATA21Q7Z572 469 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 KLHDC8BQ8IXV7 354 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 LRRC8CQ8TDW0 803 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CCT6BQ92526 530 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 PITPNM3Q9BZ71 974 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 VPS11Q9H270 941 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CASS4Q9NQ75 786 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 OLA1Q9NTK5 396 aaKnown RBP26.3■■□□□ 1.8
CPNE1-216ENST00000437340 GMIPQ9P107 970 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 HS3ST4Q9Y661 456 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 CCT8L1PA6NM43 557 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 TBKBP1A7MCY6 615 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 AP3B1O00203 1094 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 LRRC43Q8N309 656 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 ATPAF2Q8N5M1 289 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 AGAP3Q96P47 875 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 TRIM56Q9BRZ2 755 aaKnown RBP26.3■■□□□ 1.8
CPNE1-216ENST00000437340 NUDT5Q9UKK9 219 aa26.3■■□□□ 1.8
CPNE1-216ENST00000437340 ARHGAP42A6NI28 874 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 E9PAM4 449 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 GOLGA8RI6L899 631 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 CACNG3O60359 315 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 MAGEA9P43362 315 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 PRPSAP1Q14558 356 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 CRYMQ14894 314 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 LACTB2Q53H82 288 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-216ENST00000437340 FBXO32Q969P5 355 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 KLF6Q99612 283 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-216ENST00000437340 SYBUQ9NX95 663 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 MKS1Q9NXB0 559 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 BFARQ9NZS9 450 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 STARD13Q9Y3M8 1113 aa26.29■■□□□ 1.8
CPNE1-216ENST00000437340 JCHAINP01591 159 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 POLBP06746 335 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 PYGBP11216 843 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 NFKB1P19838 968 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TUBP50607 506 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TBX4P57082 545 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 NIPAL4Q0D2K0 466 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 FRG1Q14331 258 aaKnown RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 ZKSCAN8Q15776 578 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 SPANXN3Q5MJ09 141 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 AFMIDQ63HM1 303 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TIFABQ6ZNK6 161 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TTC9BQ8N6N2 239 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 RTL3Q8N8U3 475 aaKnown RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 B3GALT6Q96L58 329 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TTPALQ9BTX7 342 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 MLPHQ9BV36 600 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 LRRC40Q9H9A6 602 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 ACTR5Q9H9F9 607 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 TLR8Q9NR97 1041 aaKnown RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 LTBP2Q14767 1821 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 DFFAO00273 331 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 DHRS4L1P0CG22 281 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 HAPLN1P10915 354 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-216ENST00000437340 DNAJB2P25686 324 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 CCNFP41002 786 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 DNAJC3Q13217 504 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 RTP2Q5QGT7 225 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 OR52K1Q8NGK4 314 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 VWCEQ96DN2 955 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 DONSONQ9NYP3 566 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 PRKAG3Q9UGI9 489 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 ARL2BPQ9Y2Y0 163 aa26.28■■□□□ 1.8
CPNE1-216ENST00000437340 EN2P19622 333 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms