RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CREB1P16220 341 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 SYN1P17600 705 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 MAGEA3P43357 314 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 TAF12Q16514 161 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 TMEM240Q5SV17 173 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 CIR1Q86X95 450 aaPredicted RBP21.63■■□□□ 1.05
PTPRF-207ENST00000436724 KLHL23Q8NBE8 558 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 MDM1Q8TC05 714 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 CEP295NLQ96MC4 621 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 BRD8Q9H0E9 1235 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 EURLQ9NYK6 297 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 HSFX1Q9UBD0 423 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 DNMT3LQ9UJW3 386 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 NYNRINQ9P2P1 1898 aaKnown RBP21.63■■□□□ 1.05
PTPRF-207ENST00000436724 LCHNA4D1U4 455 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 LILRB3O75022 631 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 CDH16O75309 829 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 ELF1P32519 619 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 TEX44Q53QW1 395 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 NADSYN1Q6IA69 706 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 ATPAF2Q8N5M1 289 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 PPM1EQ8WY54 764 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 CFAP36Q96G28 342 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 FRMD8Q9BZ67 464 aaPredicted RBP21.63■■□□□ 1.05
PTPRF-207ENST00000436724 ZBP1Q9H171 429 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 NOL6Q9H6R4 1146 aaKnown RBP21.63■■□□□ 1.05
PTPRF-207ENST00000436724 PPANQ9NQ55 473 aaKnown RBP21.63■■□□□ 1.05
PTPRF-207ENST00000436724 IGSF9Q9P2J2 1179 aa21.63■■□□□ 1.05
PTPRF-207ENST00000436724 MAFKO60675 156 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 FAM107AO95990 144 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 CNPP09543 421 aaKnown RBP21.62■■□□□ 1.05
PTPRF-207ENST00000436724 RING1Q06587 406 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 TADA2BQ86TJ2 420 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 C7orf61Q8IZ16 206 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 PDZD8Q8NEN9 1154 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 ARHGEF2Q92974 986 aaKnown RBP21.62■■□□□ 1.05
PTPRF-207ENST00000436724 MYRFLQ96LU7 910 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 XPO6Q96QU8 1125 aaKnown RBP21.62■■□□□ 1.05
PTPRF-207ENST00000436724 PRMT1Q99873 361 aaKnown RBP21.62■■□□□ 1.05
PTPRF-207ENST00000436724 ZYG11BQ9C0D3 744 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 PLAC1Q9HBJ0 212 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 INSL5Q9Y5Q6 135 aa21.62■■□□□ 1.05
PTPRF-207ENST00000436724 C2orf78A6NCI8 922 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 PHBP35232 272 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 CRADDP78560 199 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 TMED2Q15363 201 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 HECTD3Q5T447 861 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 SNX30Q5VWJ9 437 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 DNAJB7Q7Z6W7 309 aaPredicted RBP21.61■■□□□ 1.05
PTPRF-207ENST00000436724 LZTR1Q8N653 840 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 CNTD1Q8N815 330 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 SIGLEC10Q96LC7 697 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 RNF38Q9H0F5 515 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 TRPM5Q9NZQ8 1165 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 INSL6Q9Y581 213 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 MAD1L1Q9Y6D9 718 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 TCRBV9S1A1TA0A576 114 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 USP12O75317 370 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 NFKB1P19838 968 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 NUMBP49757 651 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 PAPOLAP51003 745 aaKnown RBP21.61■■□□□ 1.05
PTPRF-207ENST00000436724 TCEAL8Q8IYN2 117 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 RPRD1AQ96P16 312 aaPredicted RBP21.61■■□□□ 1.05
PTPRF-207ENST00000436724 SELENOSQ9BQE4 189 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 GKN1Q9NS71 199 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 ZC3H7BQ9UGR2 993 aaKnown RBP21.61■■□□□ 1.05
PTPRF-207ENST00000436724 LGALS13Q9UHV8 139 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 PLXNA4Q9HCM2 1894 aa21.61■■□□□ 1.05
PTPRF-207ENST00000436724 IGLV3-10A0A075B6K4 115 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 GMNCA6NCL1 334 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 MTSS1O43312 755 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CPP00450 1065 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CCNB1P14635 433 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 VEPH1Q14D04 833 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 AFMIDQ63HM1 303 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 PACS2Q86VP3 889 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CHSY1Q86X52 802 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 OVCA2Q8WZ82 227 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 TEKT5Q96M29 485 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 STMN4Q9H169 189 aaPredicted RBP21.6■■□□□ 1.05
PTPRF-207ENST00000436724 ACSS3Q9H6R3 686 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 UBP1Q9NZI7 540 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 TTLL3Q9Y4R7 772 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 WASH4PA8MWX3 477 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CTSAP10619 480 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 RHOQP17081 205 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CCNCP24863 283 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 MMP13P45452 471 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 COG7P83436 770 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 NUGGCQ68CJ6 796 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 RFWD3Q6PCD5 774 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 OTOP3Q7RTS5 596 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 TMEM150AQ86TG1 271 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 SPATS2Q86XZ4 545 aaKnown RBP21.6■■□□□ 1.05
PTPRF-207ENST00000436724 CLP1Q92989 425 aaKnown RBP21.6■■□□□ 1.05
PTPRF-207ENST00000436724 TSGA13Q96PP4 275 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 GBA3Q9H227 469 aa21.6■■□□□ 1.05
PTPRF-207ENST00000436724 XAB2Q9HCS7 855 aaKnown RBP21.6■■□□□ 1.05
PTPRF-207ENST00000436724 ALG13Q9NP73 1137 aaKnown RBP21.6■■□□□ 1.05
PTPRF-207ENST00000436724 EIF2B3Q9NR50 452 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms