RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SIPA1Q96FS4 1042 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 FAM84AQ96KN4 292 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 TEX15Q9BXT5 2789 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 B3GNT5Q9BYG0 378 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 SEMA6CQ9H3T2 930 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 FBXO44Q9H4M3 255 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 ACSS3Q9H6R3 686 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 DMAP1Q9NPF5 467 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 THAP10Q9P2Z0 257 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 CCDC39Q9UFE4 941 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 ZNF510Q9Y2H8 683 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 STON1Q9Y6Q2 735 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
NIF3L1-208ENST00000436412 TEX51A0A1B0GUA7 166 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 A0A1B0GVT2 93 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 FAM149AA5PLN7 773 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 KCNJ18B7U540 433 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 H3BQV1 296 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 PAPSS1O43252 624 aaPredicted RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 WNT11O96014 354 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 IRF1P10914 325 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 ATP5C1P36542 298 aaKnown RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 EIF2S3P41091 472 aaKnown RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 CSNK1EP49674 416 aaKnown RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 CDH8P55286 799 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 KIF19Q2TAC6 998 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 RPS26P11Q5JNZ5 115 aaPredicted RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 KLHDC10Q6PID8 442 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 TPGS1Q6ZTW0 290 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 STXBP4Q6ZWJ1 553 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 ZNF843Q8N446 348 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 WBP2Q969T9 261 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 SMARCD1Q96GM5 515 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 TNIP3Q96KP6 325 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 KCNK16Q96T55 309 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 OSBPL1AQ9BXW6 950 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 PCIF1Q9H4Z3 704 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 TLR8Q9NR97 1041 aaKnown RBP8.83□□□□□ -1
NIF3L1-208ENST00000436412 TBC1D7Q9P0N9 293 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 GMIPQ9P107 970 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 FTSJ1Q9UET6 329 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
NIF3L1-208ENST00000436412 BTBD3Q9Y2F9 522 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 ANKRD6Q9Y2G4 727 aa8.83□□□□□ -1
NIF3L1-208ENST00000436412 RP1L1Q8IWN7 2480 aaPredicted RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 PTPRJQ12913 1337 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 UBR5O95071 2799 aaPredicted RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 FRMD3A2A2Y4 597 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 J3QKU1 62 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 PLK4O00444 970 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 CLDN5O00501 218 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 TIMM44O43615 452 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 JUPP14923 745 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 TNNI1P19237 187 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 ITPKBP27987 946 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 ATICP31939 592 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 IRAK1P51617 712 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 CASP5P51878 434 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 EIF4HQ15056 248 aaKnown RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 SF3A1Q15459 793 aaKnown RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 DHRS13Q6UX07 377 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 GPR155Q7Z3F1 870 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 MARCH9Q86YJ5 346 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 CBWD2Q8IUF1 395 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 GIMAP7Q8NHV1 300 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 SYAP1Q96A49 352 aaPredicted RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 ERLEC1Q96DZ1 483 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 FCRL3Q96P31 734 aaPredicted RBP8.82□□□□□ -1
NIF3L1-208ENST00000436412 MED10Q9BTT4 135 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 DPEP3Q9H4B8 488 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 ZFYVE1Q9HBF4 777 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 NME7Q9Y5B8 376 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 SNX11Q9Y5W9 270 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 BOD1L1Q8NFC6 3051 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 MYO9AB2RTY4 2548 aa8.82□□□□□ -1
NIF3L1-208ENST00000436412 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 TBX18O95935 607 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 CST3P01034 146 aaPredicted RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 PENKP01210 267 aaPredicted RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 PRNPP04156 253 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 DLATP10515 647 aaKnown RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 IDEP14735 1019 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 RAB6AP20340 208 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 CHKAP35790 457 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 IL12RB1P42701 662 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 CTSKP43235 329 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 COPAP53621 1224 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 MFAP3P55082 362 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 GRIN1Q05586 938 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 TRPC3Q13507 836 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 RTP5Q14D33 572 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 SNRNP35Q16560 246 aaKnown RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 HP1BP3Q5SSJ5 553 aaPredicted RBP8.81□□□□□ -1
NIF3L1-208ENST00000436412 RRAGBQ5VZM2 374 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 PAQR9Q6ZVX9 377 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 BRAPQ7Z569 592 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 ANKS1BQ7Z6G8 1248 aa8.81□□□□□ -1
NIF3L1-208ENST00000436412 TADA2BQ86TJ2 420 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms