RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CDO1Q16878 200 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 LRRC8EQ6NSJ5 796 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 PARP8Q8N3A8 854 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF606Q8WXB4 792 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 LPGAT1Q92604 370 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF516Q92618 1163 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF597Q96LX8 424 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ACO2Q99798 780 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NPLQ9BXD5 320 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 UNKQ9C0B0 810 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GNPTGQ9UJJ9 305 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 PRPF19Q9UMS4 504 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZHX2Q9Y6X8 837 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CSDE1O75534 798 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GDF11O95390 407 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 IDUAP35475 653 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 OPRL1P41146 370 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MOXD1Q6UVY6 613 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CDAN1Q8IWY9 1227 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SLC4A11Q8NBS3 891 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CRYGNQ8WXF5 182 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MXRA8Q9BRK3 442 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 POLE3Q9NRF9 147 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SMOXQ9NWM0 555 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 EXOC7Q9UPT5 735 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NUP98P52948 1817 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 IGLV3-22A0A075B6J6 115 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MT-CO1P00395 513 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NCAM1P13591 858 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ARSAP15289 507 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CD19P15391 556 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 KDELR1P24390 212 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GRK2P25098 689 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MYBPC2Q14324 1141 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 LSM12Q3MHD2 195 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ARL13BQ3SXY8 428 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SCARA5Q6ZMJ2 495 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 PLAC1Q9HBJ0 212 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 PSAT1Q9Y617 370 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CPQQ9Y646 472 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF195O14628 629 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SLC26A4O43511 780 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 STAM2O75886 525 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 BCAS2O75934 225 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 BMP10O95393 424 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 FOSP01100 380 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 RBL1P28749 1068 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ATP6V1E1P36543 226 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 WNT7BP56706 349 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NAPRTQ6XQN6 538 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 BBS12Q6ZW61 710 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 EXOC8Q8IYI6 725 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NETO2Q8NC67 525 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ZC3H15Q8WU90 426 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 RNF38Q9H0F5 515 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 IL1RL2Q9HB29 575 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 DNAJC28Q9NX36 388 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 KLQ9UEF7 1012 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CCNL1Q9UK58 526 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CLOCKO15516 846 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MT-ND1P03886 318 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ALDOAP04075 364 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ENO2P09104 434 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CDH6P55285 790 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 TUBA4AP68366 448 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 XKR9Q5GH70 373 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GK5Q6ZS86 529 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CAND1Q86VP6 1230 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 HTRA1Q92743 480 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MRGBPQ9NV56 204 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GPATCH2LQ9NWQ4 482 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NXF1Q9UBU9 619 aaKnown RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 MAST2Q6P0Q8 1798 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SLC15A5A6NIM6 579 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 KCNU1A8MYU2 1149 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 DYNC1LI2O43237 492 aaPredicted RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MATN1P21941 496 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 LSM3P62310 102 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GCNT1Q02742 428 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 CYP24A1Q07973 514 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 ORC1Q13415 861 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 IL31Q6EBC2 164 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SCYL2Q6P3W7 929 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 TTC30AQ86WT1 665 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 KIAA0319LQ8IZA0 1049 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 HM13Q8TCT9 377 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SLC39A3Q9BRY0 314 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SMARCAD1Q9H4L7 1026 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 EFCAB1Q9HAE3 211 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 E7ENX8 843 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 ATP5BP06576 529 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 INHBBP09529 407 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MMP8P22894 467 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 AOC3Q16853 763 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RPL10LQ96L21 214 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 STRA6Q9BX79 667 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms