RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 YME1L1Q96TA2 773 aa7.82□□□□□ -1.16
PTPRK-212ENST00000434424 DPCDQ9BVM2 203 aaPredicted RBP7.82□□□□□ -1.16
PTPRK-212ENST00000434424 TXLNGYQ9BZA5 131 aa7.82□□□□□ -1.16
PTPRK-212ENST00000434424 PCDHGB4Q9UN71 923 aa7.82□□□□□ -1.16
PTPRK-212ENST00000434424 DUSP10Q9Y6W6 482 aa7.82□□□□□ -1.16
PTPRK-212ENST00000434424 KDM3AQ9Y4C1 1321 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 EP400Q96L91 3159 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 GOLGA6L10A0A0M3HER8 536 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 TMEM232C9JQI7 657 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 PSMD9O00233 223 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 CSH1P0DML2 217 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 CSH2P0DML3 217 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 ALADP13716 330 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 APOBEC3AP31941 199 aaPredicted RBP7.81□□□□□ -1.16
PTPRK-212ENST00000434424 MSX2P35548 267 aaPredicted RBP7.81□□□□□ -1.16
PTPRK-212ENST00000434424 NLRP5P59047 1200 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 ZBED6P86452 979 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 IKBIPQ70UQ0 350 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 ANKRD35Q8N283 1001 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 NOC3LQ8WTT2 800 aaKnown RBP7.81□□□□□ -1.16
PTPRK-212ENST00000434424 RUFY2Q8WXA3 655 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 NPIPB3Q92617 1050 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 SH3KBP1Q96B97 665 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 ELP4Q96EB1 424 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 FAM120BQ96EK7 910 aaKnown RBP7.81□□□□□ -1.16
PTPRK-212ENST00000434424 RADILQ96JH8 1075 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 FEM1CQ96JP0 617 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 DCLRE1CQ96SD1 692 aaKnown RBP7.81□□□□□ -1.16
PTPRK-212ENST00000434424 MXD3Q9BW11 206 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 AMBRA1Q9C0C7 1298 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 MUC13Q9H3R2 512 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 PDE11AQ9HCR9 933 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 ZDHHC7Q9NXF8 308 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 KCNE5Q9UJ90 142 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 SARDHQ9UL12 918 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 NALCNQ8IZF0 1738 aa7.81□□□□□ -1.16
PTPRK-212ENST00000434424 CDC42BPGQ6DT37 1551 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 M0QZQ0 153 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 VILLO15195 856 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 ZNF185O15231 689 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 PPM1DO15297 605 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SPARCP09486 303 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 NFKBIAP25963 317 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 ARL1P40616 181 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SNX16P57768 344 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 IFI35P80217 286 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SP2Q02086 613 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 TBCCQ15814 346 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SZRD1Q7Z422 152 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SRBD1Q8N5C6 995 aaKnown RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 RFWD2Q8NHY2 731 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 VPS50Q96JG6 964 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 CLPBQ9H078 707 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 SEMA4BQ9NPR2 832 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 HCFC1R1Q9NWW0 138 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 KCND2Q9NZV8 630 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 HCN3Q9P1Z3 774 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 CNOT11Q9UKZ1 510 aaKnown RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 IQGAP3Q86VI3 1631 aa7.8□□□□□ -1.16
PTPRK-212ENST00000434424 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.8□□□□□ -1.16
PTPRK-212ENST00000434424 PASKQ96RG2 1323 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 USP32Q8NFA0 1604 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NRXN3Q9Y4C0 1643 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NPIPB15A6NHN6 443 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 FAM90A7PA6NKC0 464 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 A8MVJ9 347 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 FAM90A22PA8MWA6 464 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 FAM90A12PA8MX19 464 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 FAM90A23PA8MXZ1 464 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 K7ESM1 405 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NOBOXO60393 691 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 RECQL4O94761 1208 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 VNN1O95497 513 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 APOA4P06727 396 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 CYP3A4P08684 503 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 PEPDP12955 493 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 GLULP15104 373 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 FOXL1Q12952 345 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NAA25Q14CX7 972 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 PLCB4Q15147 1175 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 DUSP28Q4G0W2 176 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 RUNDC3AQ59EK9 446 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 ZNF766Q5HY98 468 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 C1QL3Q5VWW1 255 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NAIF1Q69YI7 327 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 CAND1Q86VP6 1230 aaKnown RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 TAGAPQ8N103 731 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 LGI4Q8N135 537 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 CNTROBQ8N137 903 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 ZNF808Q8N4W9 903 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 TNIP2Q8NFZ5 429 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 SAAL1Q96ER3 474 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 NR1H4Q96RI1 486 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 TPSD1Q9BZJ3 242 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 GLOD4Q9HC38 313 aa7.79□□□□□ -1.16
PTPRK-212ENST00000434424 TLR8Q9NR97 1041 aaKnown RBP7.79□□□□□ -1.16
PTPRK-212ENST00000434424 EIF2B4Q9UI10 523 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms