RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 DYTNA2CJ06 578 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 MCIDASD6RGH6 385 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 POC1B-GALNT4F8VUJ3 575 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SCGB1D1O95968 90 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 CHRM5P08912 532 aaPredicted RBP6.48□□□□□ -1.37
USP54-206ENST00000433394 GPD1P21695 349 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 PSMA4P25789 261 aaKnown RBP6.48□□□□□ -1.37
USP54-206ENST00000433394 TACR3P29371 465 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 STAT1P42224 750 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SKIV2L2P42285 1042 aaKnown RBP6.48□□□□□ -1.37
USP54-206ENST00000433394 MVDP53602 400 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SHC2P98077 582 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 B4GALNT1Q00973 533 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SETQ01105 290 aaPredicted RBP6.48□□□□□ -1.37
USP54-206ENST00000433394 TDGQ13569 410 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 AADACL2Q6P093 401 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 DHRS13Q6UX07 377 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 NEK10Q6ZWH5 1172 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 TMTC3Q6ZXV5 915 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 FASTKD5Q7L8L6 764 aaKnown RBP6.48□□□□□ -1.37
USP54-206ENST00000433394 VRK3Q8IV63 474 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 BRSK2Q8IWQ3 736 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 GHDCQ8N2G8 530 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 GALNT4Q8N4A0 578 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 FAM47BQ8NA70 645 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 ETNPPLQ8TBG4 499 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 SDF4Q9BRK5 362 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 ARHGAP39Q9C0H5 1083 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 CPNE5Q9HCH3 593 aa6.48□□□□□ -1.37
USP54-206ENST00000433394 PI4KAP2A4QPH2 592 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 NPIPB8E9PQR5 432 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 PRYO14603 147 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 SGPL1O95470 568 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 HNF1BP35680 557 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 RARRES1P49788 294 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 CCT4P50991 539 aaKnown RBP6.47□□□□□ -1.37
USP54-206ENST00000433394 RARSP54136 660 aaKnown RBP6.47□□□□□ -1.37
USP54-206ENST00000433394 ADPRHP54922 357 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 NEXNQ0ZGT2 675 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 MAMLD1Q13495 774 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 PUM1Q14671 1186 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP54-206ENST00000433394 C10orf76Q5T2E6 689 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 KLHL24Q6TFL4 600 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 RANBP10Q6VN20 620 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 B4GALNT4Q76KP1 1039 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 TICAM2Q86XR7 235 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 KLBQ86Z14 1044 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 ADGRF3Q8IZF5 1079 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 RUFY2Q8WXA3 655 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 CELF1Q92879 486 aaKnown RBP6.47□□□□□ -1.37
USP54-206ENST00000433394 UROC1Q96N76 676 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 EYA3Q99504 573 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 BARD1Q99728 777 aaKnown RBP6.47□□□□□ -1.37
USP54-206ENST00000433394 NUDT16L1Q9BRJ7 211 aaKnown RBP6.47□□□□□ -1.37
USP54-206ENST00000433394 CHCHD6Q9BRQ6 235 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 IFT27Q9BW83 186 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 HDHD5Q9BXW7 423 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 KRTAP4-2Q9BYR5 136 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 IL1RAPL1Q9NZN1 696 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 KCND2Q9NZV8 630 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 FOXJ2Q9P0K8 574 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 WNT6Q9Y6F9 365 aa6.47□□□□□ -1.37
USP54-206ENST00000433394 KAT7O95251 611 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 ADRB1P08588 477 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 SFPQP23246 707 aaKnown RBP eCLIP6.46□□□□□ -1.38
USP54-206ENST00000433394 ITPKBP27987 946 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 CTCFP49711 727 aaPredicted RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 SIM1P81133 766 aaPredicted RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 DMWDQ09019 674 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 FOXI1Q12951 378 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 GAB1Q13480 694 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 KPNB1Q14974 876 aaKnown RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 ZNF766Q5HY98 468 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 MTFR2Q6P444 385 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 INO80CQ6PI98 192 aaPredicted RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 ULK2Q8IYT8 1036 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 NME8Q8N427 588 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 ADAD1Q96M93 576 aaKnown RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 PHF7Q9BWX1 381 aaPredicted RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 SLC25A18Q9H1K4 315 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 EPHX3Q9H6B9 360 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 IL21RQ9HBE5 538 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 EIF2B3Q9NR50 452 aaKnown RBP6.46□□□□□ -1.38
USP54-206ENST00000433394 ARL15Q9NXU5 204 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 NSMCE4AQ9NXX6 385 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 MPP6Q9NZW5 540 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 SEMA5BQ9P283 1151 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 PACSIN3Q9UKS6 424 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 PKP3Q9Y446 797 aa6.46□□□□□ -1.38
USP54-206ENST00000433394 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 TEX22C9J3V5 150 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 NARSO43776 548 aaKnown RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 CHRM4P08173 479 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 ACADMP11310 421 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 UBL4AP11441 157 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 LYL1P12980 280 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 COX7A2P14406 83 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms