RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KCNB1Q14721 858 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 SEC23BQ15437 767 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 GPR162Q16538 588 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 MEA1Q16626 185 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC45A4Q5BKX6 768 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 UBAP2Q5T6F2 1119 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CCDC30Q5VVM6 783 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 SNX30Q5VWJ9 437 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 C17orf99Q6UX52 265 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 NAPRTQ6XQN6 538 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 C4orf50Q6ZRC1 276 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 FASTKD5Q7L8L6 764 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 R3HCC1LQ7Z5L2 792 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 GRASPQ7Z6J2 395 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 NEK8Q86SG6 692 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 MON1AQ86VX9 555 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 Q8N1X5 172 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 FAM110DQ8TAY7 271 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZFPM2Q8WW38 1151 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 IGFBPL1Q8WX77 278 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 RAB40AQ8WXH6 277 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CELF1Q92879 486 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 DAZAP1Q96EP5 407 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 RSRC1Q96IZ7 334 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 UROC1Q96N76 676 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZNF347Q96SE7 839 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 PRRX2Q99811 253 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 FRMD8Q9BZ67 464 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 MROH8Q9H579 483 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 PLEKHA5Q9HAU0 1116 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CYP4F11Q9HBI6 524 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ERVK-5Q9HDB9 667 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 Q9N2J8 555 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ASNSD1Q9NWL6 643 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ORC3Q9UBD5 711 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 NRBP1Q9UHY1 535 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ST3GAL5Q9UNP4 418 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 OSGIN2Q9Y236 505 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 REXO2Q9Y3B8 237 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 BICRAQ9NZM4 1560 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 A6NCN8 305 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 NPIPB15A6NHN6 443 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 NPIPB8E9PQR5 432 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 K7ENM7 598 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 LDLRAD4O15165 306 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 FOXN1O15353 648 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 ANP32CO43423 234 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 ORC4O43929 436 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 PTP4A3O75365 173 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 C1QL1O75973 258 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 JTBO76095 146 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 URODP06132 367 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 ENO1P06733 434 aaKnown RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CHRM4P08173 479 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CYP2D6P10635 497 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 LAMP2P13473 410 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CYP4B1P13584 511 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TNFRSF1AP19438 455 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TM4SF1P30408 202 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 MAPK4P31152 587 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 BYSLQ13895 437 aaKnown RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 KRT32Q14532 448 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 PUM1Q14671 1186 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 RPE65Q16518 533 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 NFIL3Q16649 462 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 GLE1Q53GS7 698 aaKnown RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 RUNDC3AQ59EK9 446 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZNF362Q5T0B9 420 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 FAM205BPQ63HN1 556 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC29A4Q7RTT9 530 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TMEM200AQ86VY9 491 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CHD1LQ86WJ1 897 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 RASAL3Q86YV0 1011 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 BRSK2Q8IWQ3 736 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 ADSSL1Q8N142 457 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 NGEFQ8N5V2 710 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 SETD9Q8NE22 299 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TNIP2Q8NFZ5 429 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 UCMAQ8WVF2 138 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 SNRNP27Q8WVK2 155 aaKnown RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 RUFY2Q8WXA3 655 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 NCSTNQ92542 709 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CAVIN3Q969G5 261 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 SARAFQ96BY9 339 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 RITA1Q96K30 269 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 FYTTD1Q96QD9 318 aaKnown RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CD180Q99467 661 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TTYH1Q9H313 450 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 BRF2Q9HAW0 419 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 IRAK4Q9NWZ3 460 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 TAS2R10Q9NYW0 307 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 UPB1Q9UBR1 384 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 SARDHQ9UL12 918 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 CLDN16Q9Y5I7 305 aa3.44□□□□□ -1.86
HMGB1P27-201ENST00000431429 EIF4G1Q04637 1599 aaKnown RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 ANKRD18BA2A2Z9 1011 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 TARM1B6A8C7 271 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 POC1B-GALNT4F8VUJ3 575 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 TNPO2O14787 897 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms