RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SF3A2Q15428 464 aaKnown RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 CDO1Q16878 200 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 C15orf59Q2T9L4 293 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 WDR59Q6PJI9 974 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 ARMCX6Q7L4S7 300 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 SETD3Q86TU7 594 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 MCOLN2Q8IZK6 566 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF366Q8N895 744 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 PIGKQ92643 395 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF419Q96HQ0 510 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 FEM1AQ9BSK4 669 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 HAUS4Q9H6D7 363 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 WSB2Q9NYS7 404 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 PPARGC1AQ9UBK2 798 aaKnown RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 EDDM13A0A1B0GTR0 161 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 GDF9O60383 454 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RNASEH1O60930 286 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SRGAP2O75044 1071 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SIN3BO75182 1162 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 CNTN5O94779 1100 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 GJB6O95452 261 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 DNTTP04053 509 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 TPM3P06753 285 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RHOCP08134 193 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 GZMAP12544 262 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ITPKAP23677 461 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RRM1P23921 792 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ADRA1BP35368 520 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF143P52747 638 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 LIMK1P53667 647 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 HDAC4P56524 1084 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RPS14P62263 151 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 KRT83P78385 493 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ALFQ53S48 1182 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SYCP2LQ5T4T6 812 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 C9orf64Q5T6V5 341 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SH3PXD2AQ5TCZ1 1133 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 PEAR1Q5VY43 1037 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF776Q68DI1 518 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 DCUN1D2Q6PH85 259 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ERMP1Q7Z2K6 904 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF571Q7Z3V5 609 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RABEPKQ7Z6M1 372 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 CADM4Q8NFZ8 388 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 OR52K2Q8NGK3 314 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 CEP76Q8TAP6 659 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 FAM172AQ8WUF8 416 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SYN2Q92777 582 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 NTAN1Q96AB6 310 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ALG14Q96F25 216 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 TOE1Q96GM8 510 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 MCEEQ96PE7 176 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RTKNQ9BST9 563 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RSPH9Q9H1X1 276 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SMOC1Q9H4F8 434 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 RETREG1Q9H6L5 497 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 TAS2R14Q9NYV8 317 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 MPP6Q9NZW5 540 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 EVLQ9UI08 416 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SLCO3A1Q9UIG8 710 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SLC25A13Q9UJS0 675 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 VPS28Q9UK41 221 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 PILRBQ9UKJ0 227 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SCML1Q9UN30 329 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 OR51B4Q9Y5P0 310 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 BZW2Q9Y6E2 419 aaKnown RBP10.09□□□□□ -0.79
HDAC6-207ENST00000430858 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SPAG17Q6Q759 2223 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
HDAC6-207ENST00000430858 TMCO5BA8MYB1 307 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 SLC30A4O14863 429 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 ATP9BO43861 1147 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 OR1E1P30953 314 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 STK19P49842 368 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-207ENST00000430858 RPL7AP62424 266 aaKnown RBP10.08□□□□□ -0.8
HDAC6-207ENST00000430858 ZBED6P86452 979 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
HDAC6-207ENST00000430858 DUOXA1Q1HG43 343 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 TRIM61Q5EBN2 209 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 WDR45BQ5MNZ6 344 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 PPP1R15BQ5SWA1 713 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 ARTNQ5T4W7 220 aa10.08□□□□□ -0.8
HDAC6-207ENST00000430858 TCEAL6Q6IPX3 200 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms