RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RAB23Q9ULC3 237 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PLEKHG1Q9ULL1 1385 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PTPN3P26045 913 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 CLK3P49761 638 aaKnown RBP16.74■□□□□ 0.27
RIF1-204ENST00000430328 FBXO39Q8N4B4 442 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 MYOM2P54296 1465 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PHKG2P15735 406 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 GPR107Q5VW38 600 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 CYP27B1O15528 508 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CYP2C8P10632 490 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CRABP2P29373 138 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 PTPN5P54829 565 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ZNF234Q14588 700 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CBWD3Q5JTY5 395 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CBWD5Q5RIA9 395 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 FAXCQ5TGI0 409 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 IER5Q5VY09 327 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 TRIM64A6NGJ6 449 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ACADMP11310 421 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 DNAJA4Q8WW22 397 aaPredicted RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 CKAP2Q8WWK9 683 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CASKIN2Q8WXE0 1202 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 OXNAD1Q96HP4 312 aaPredicted RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 AP4E1Q9UPM8 1137 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CORO2BQ9UQ03 480 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 LRG1P02750 347 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 PDK2Q15119 407 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 TPCN2Q8NHX9 752 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 MID1IP1Q9NPA3 183 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ARMCX1Q9P291 453 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 SNAP23O00161 211 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 MRASO14807 208 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 TIPRLO75663 272 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 TMEM253P0C7T8 217 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 MUTP22033 750 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 SPIDRQ14159 915 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 HDDC3Q8N4P3 179 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CLIC5Q9NZA1 410 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ZNF180Q9UJW8 692 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 COG5Q9UP83 839 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CRYL1Q9Y2S2 319 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 WDR19Q8NEZ3 1342 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ATCAYQ86WG3 371 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 BHMTQ93088 406 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 CDADC1Q9BWV3 514 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 DMTF1Q9Y222 760 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 RBM44Q6ZP01 1051 aaKnown RBP16.73■□□□□ 0.27
RIF1-204ENST00000430328 PCDH19Q8TAB3 1148 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
RIF1-204ENST00000430328 A0A1W2PQJ5 194 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 SDC2P34741 201 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 GRTP1Q5TC63 336 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 EIF1ADQ8N9N8 165 aaKnown RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 AHCYL2Q96HN2 611 aaKnown RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 DDIT4Q9NX09 232 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 ATMINO43313 823 aaPredicted RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 SERPINE1P05121 402 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 TRMT11Q7Z4G4 463 aaKnown RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 INO80EQ8NBZ0 244 aaPredicted RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 OR2L3Q8NG85 312 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 UBA3Q8TBC4 463 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 TEX47Q8TBZ9 253 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 TRNAU1APQ9NX07 287 aaKnown RBP16.72■□□□□ 0.27
RIF1-204ENST00000430328 NESP48681 1621 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 M0QYT0 321 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 UGT2B15P54855 530 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 MCFD2Q8NI22 146 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 ING5Q8WYH8 240 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 NECTIN3Q9NQS3 549 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 RNF146Q9NTX7 359 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 PSMD13Q9UNM6 376 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 NR2F6P10588 404 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 CAV3P56539 151 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 METTL6Q8TCB7 284 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 ZNF350Q9GZX5 532 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 MT-CO1P00395 513 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 C9P02748 559 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 RAP1GAPP47736 663 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 C2orf69Q8N8R5 385 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 OR5T3Q8NGG3 340 aa16.72■□□□□ 0.27
RIF1-204ENST00000430328 SNIP1Q8TAD8 396 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms