RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 NME5P56597 212 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.32
LDB3-205ENST00000429277 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 TMEM79Q9BSE2 394 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 TRIM8Q9BZR9 551 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 NFKBIL1Q9UBC1 381 aaPredicted RBP13.02□□□□□ -0.32
LDB3-205ENST00000429277 CPS1P31327 1500 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 NDUFB5O43674 189 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 POMCP01189 267 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 MGAT1P26572 445 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 ALDH9A1P49189 494 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 HK2P52789 917 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 TMC3Q7Z5M5 1100 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 EDEM1Q92611 657 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 PROX1Q92786 737 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 C18orf25Q96B23 403 aaPredicted RBP13.02□□□□□ -0.33
LDB3-205ENST00000429277 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
LDB3-205ENST00000429277 WDR27A2RRH5 827 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 LACTBL1A8MY62 500 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 TNFAIP8O95379 198 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 TYMPP19971 482 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 S100A3P33764 101 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 ACSM2AQ08AH3 577 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 LYPLAL1Q5VWZ2 237 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 ACSM2BQ68CK6 577 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 EPHX4Q8IUS5 362 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 WNT8BQ93098 351 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 MRIQ9BWK5 157 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 DMGDHQ9UI17 866 aaKnown RBP13.02□□□□□ -0.33
LDB3-205ENST00000429277 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.33
LDB3-205ENST00000429277 SGTAO43765 313 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 POLR2EP19388 210 aaKnown RBP13.02□□□□□ -0.33
LDB3-205ENST00000429277 ATP6V1C1P21283 382 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 IL2P60568 153 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 ACOX1Q15067 660 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 TCEA2Q15560 299 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 PCID2Q5JVF3 399 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 FIG4Q92562 907 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 SNX8Q9Y5X2 465 aa13.02□□□□□ -0.33
LDB3-205ENST00000429277 H0YC42 278 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 TBC1D12O60347 775 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 UBOX5O94941 541 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 PECAM1P16284 738 aaPredicted RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 NTSP30990 170 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 NEK3P51956 506 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 LY6KQ17RY6 165 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 GPC2Q8N158 579 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 SLC2A14Q8TDB8 520 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 UTP15Q8TED0 518 aaKnown RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 CATSPER2Q96P56 530 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 IL25Q9H293 177 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 KCNK4Q9NYG8 393 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 SAE1Q9UBE0 346 aaPredicted RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FAM25AB3EWG3 89 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FAM25CB3EWG5 89 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FAM25GB3EWG6 89 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FCHO1O14526 889 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 VAPBO95292 243 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 BOP1Q14137 746 aaKnown RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 SETMARQ53H47 684 aaPredicted RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 NEK5Q6P3R8 708 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ZFP28Q8NHY6 868 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 PHF21BQ96EK2 531 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 NINJ2Q9NZG7 142 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 UBP1Q9NZI7 540 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ACTL7BQ9Y614 415 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 GLI1P08151 1106 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FGFR1P11362 822 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ZNF24P17028 368 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 AMPD1P23109 780 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ADORA2AP29274 412 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 STX4Q12846 297 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 KCNT2Q6UVM3 1135 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 GPSM1Q86YR5 675 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 STAG3L4Q8TBR4 150 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 PORCNQ9H237 461 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 HMX1Q9NP08 348 aaPredicted RBP13.01□□□□□ -0.33
LDB3-205ENST00000429277 RAB21Q9UL25 225 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 EPN2O95208 641 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 MIPP30301 263 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 PRKCIP41743 596 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 INSCQ1MX18 579 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 TRIQKQ629K1 86 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 TRPC4APQ8TEL6 797 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms