RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 BTBD3Q9Y2F9 522 aa17.62■□□□□ 0.41
TRIM39-209ENST00000428728 TARSL2A2RTX5 802 aaKnown RBP17.61■□□□□ 0.41
TRIM39-209ENST00000428728 PES1O00541 588 aaKnown RBP17.61■□□□□ 0.41
TRIM39-209ENST00000428728 FLRT2O43155 660 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 VAV1P15498 845 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 SLC8A1P32418 973 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 GALCP54803 685 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 IL9RQ01113 521 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 CXorf57Q6NSI4 855 aaKnown RBP17.61■□□□□ 0.41
TRIM39-209ENST00000428728 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 AADATQ8N5Z0 425 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 RHBDD1Q8TEB9 315 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 ADAMTS14Q8WXS8 1223 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 PTPRN2Q92932 1015 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 SLC6A18Q96N87 628 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 FAM129BQ96TA1 746 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 ORAI3Q9BRQ5 295 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 OSGEPQ9NPF4 335 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 VANGL2Q9ULK5 521 aa17.61■□□□□ 0.41
TRIM39-209ENST00000428728 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 GOLGA8CPA6NN73 597 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 FOXN3O00409 490 aaPredicted RBP17.6■□□□□ 0.41
TRIM39-209ENST00000428728 ADH1BP00325 375 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 IL1BP01584 269 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 CLCN1P35523 988 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 NNMTP40261 264 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 CCT8P50990 548 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 SFSWAPQ12872 951 aaKnown RBP17.6■□□□□ 0.41
TRIM39-209ENST00000428728 SLC12A1Q13621 1099 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
TRIM39-209ENST00000428728 RAPGEF1Q13905 1077 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 FBXL22Q6P050 247 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 SLC26A9Q7LBE3 791 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 SLCO6A1Q86UG4 719 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 IGSF8Q969P0 613 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 NDST4Q9H3R1 872 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 FZD4Q9ULV1 537 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 PCDHGB2Q9Y5G2 931 aa17.6■□□□□ 0.41
TRIM39-209ENST00000428728 SPEGQ15772 3267 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 COL5A1P20908 1838 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 A0A1W2PPC4 97 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 H0Y8X5 98 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 M0QYT0 321 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 ADPRHP54922 357 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 C21orf59P57076 290 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 RACK1P63244 317 aaKnown RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 SLC6A3Q01959 620 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 SULT2A1Q06520 285 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 ELAVL3Q14576 367 aaKnown RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 VWA3BQ502W6 1294 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 OTUD1Q5VV17 481 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 LRSAM1Q6UWE0 723 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 SND1Q7KZF4 910 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 GLRX5Q86SX6 157 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 OR52K2Q8NGK3 314 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 OR2T34Q8NGX1 318 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 OR14C36Q8NHC7 312 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 BAHD1Q8TBE0 780 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 TUBGCP2Q9BSJ2 902 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 ACE2Q9BYF1 805 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-209ENST00000428728 SIK2Q9H0K1 926 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 PDCL3Q9H2J4 239 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 AASDHPPTQ9NRN7 309 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 SLC25A13Q9UJS0 675 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 FHOD1Q9Y613 1164 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 HS3ST4Q9Y661 456 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 ASPMQ8IZT6 3477 aa17.59■□□□□ 0.41
TRIM39-209ENST00000428728 CFAP47Q6ZTR5 3102 aa17.58■□□□□ 0.41
TRIM39-209ENST00000428728 SRRM3A6NNA2 597 aaPredicted RBP17.58■□□□□ 0.4
TRIM39-209ENST00000428728 PLK4O00444 970 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 PAGE1O75459 146 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 ATXN1LP0C7T5 689 aaKnown RBP17.58■□□□□ 0.4
TRIM39-209ENST00000428728 TFE3P19532 575 aaPredicted RBP17.58■□□□□ 0.4
TRIM39-209ENST00000428728 C5AR1P21730 350 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 NOS2P35228 1153 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 CTSKP43235 329 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 SULT1E1P49888 294 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 METAP1P53582 386 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 SNX16P57768 344 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.4
TRIM39-209ENST00000428728 KCNJ12Q14500 433 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 SUZ12Q15022 739 aaKnown RBP17.58■□□□□ 0.4
TRIM39-209ENST00000428728 ACCSLQ4AC99 568 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 TAF3Q5VWG9 929 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 FAM71AQ8IYT1 594 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 CDC6Q99741 560 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 EBF2Q9HAK2 575 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 PIGVQ9NUD9 493 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 VPS28Q9UK41 221 aa17.58■□□□□ 0.4
TRIM39-209ENST00000428728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.57■□□□□ 0.4
TRIM39-209ENST00000428728 BNIP3LO60238 219 aa17.57■□□□□ 0.4
TRIM39-209ENST00000428728 WNT1P04628 370 aa17.57■□□□□ 0.4
TRIM39-209ENST00000428728 GOT1P17174 413 aa17.57■□□□□ 0.4
TRIM39-209ENST00000428728 GRK6P43250 576 aa17.57■□□□□ 0.4
TRIM39-209ENST00000428728 PLK1P53350 603 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms