RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SLCO1A2P46721 670 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 EIF3BP55884 814 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CAV1Q03135 178 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TMEM184AQ6ZMB5 413 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 SCUBE3Q8IX30 993 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GJD3Q8N144 294 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 SLC35F6Q8N357 371 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CELF5Q8N6W0 485 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TTC17Q96AE7 1141 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CABS1Q96KC9 395 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TTYH1Q9H313 450 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 SNX24Q9Y343 169 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 A6NNZ2 444 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TXNDC9O14530 226 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 NRP1O14786 923 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 B4GALT5O43286 388 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 AVILO75366 819 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 MAP3K6O95382 1288 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 HOXB2P14652 356 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CYP2A7P20853 494 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GRK2P25098 689 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CSTF2P33240 577 aaKnown RBP eCLIP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 NRLP54845 237 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GRB10Q13322 594 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PDK2Q15119 407 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CCNG2Q16589 344 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TUBB8Q3ZCM7 444 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 EEF1DP3Q658K8 133 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 LAYNQ6UX15 382 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CNPY4Q8N129 248 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CEP70Q8NHQ1 597 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 POLR1EQ9GZS1 481 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GOLPH3Q9H4A6 298 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GPATCH2LQ9NWQ4 482 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 FAM32AQ9Y421 112 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 KNL1Q8NG31 2342 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TRBV23OR9-2A0A075B6M9 112 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ENO2P09104 434 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 RPL21P46778 160 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 MYBPC2Q14324 1141 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CBX2Q14781 532 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CYP2A13Q16696 494 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 C4orf22Q6V702 233 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 MCEMP1Q8IX19 187 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ZBED8Q8IZ13 594 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 SPDL1Q96EA4 605 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 HSFY1Q96LI6 401 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 DNAJC28Q9NX36 388 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PACSIN2Q9UNF0 486 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PRRC2BQ5JSZ5 2229 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 EML1O00423 815 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ACSL4O60488 711 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 KRT33AO76009 404 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 LSM8O95777 96 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TLX1P31314 330 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CNTN1Q12860 1018 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 GRM3Q14832 879 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SHC4Q6S5L8 630 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 LPCAT2Q7L5N7 544 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ANKS1BQ7Z6G8 1248 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 PIGZQ86VD9 579 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ZDHHC14Q8IZN3 488 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CACNA2D3Q8IZS8 1091 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 DSELQ8IZU8 1212 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 EMC1Q8N766 993 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CMASQ8NFW8 434 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SH3RF2Q8TEC5 729 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MED8Q96G25 268 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 KCNS3Q9BQ31 491 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 OSBPL8Q9BZF1 889 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SLC2A4RGQ9NR83 387 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TBC1D13Q9NVG8 400 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 INTS7Q9NVH2 962 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TMEM63CQ9P1W3 806 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ZC3H7BQ9UGR2 993 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CDV3Q9UKY7 258 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MRPS33Q9Y291 106 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 URADA6NGE7 173 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ARL5CA6NH57 179 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SLC38A8A6NNN8 435 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 GLP2RO95838 553 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CNPP09543 421 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 IDSP22304 550 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ALAS2P22557 587 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 PSMA3P25788 255 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 LSP1P33241 339 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SPRP35270 261 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CLK3P49761 638 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms