RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 FBXL22Q6P050 247 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 C14orf80Q86SX3 495 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 SLC47A2Q86VL8 602 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 MARCH9Q86YJ5 346 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 GANCQ8TET4 914 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 TRIM62Q9BVG3 475 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 FAM204AQ9H8W3 233 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 PLCB1Q9NQ66 1216 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.16
SEC13-210ENST00000428626 DDIT4Q9NX09 232 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 PCDHGB2Q9Y5G2 931 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 CACNA1GO43497 2377 aa16.02■□□□□ 0.15
SEC13-210ENST00000428626 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 A0A1W2PPC4 97 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 FAM170AA1A519 330 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
SEC13-210ENST00000428626 F5H5T6 163 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 PLK4O00444 970 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 RNASEH2AO75792 299 aaKnown RBP16.01■□□□□ 0.15
SEC13-210ENST00000428626 DRD3P35462 400 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 PSMD8P48556 350 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 PLK1P53350 603 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 UBE2HP62256 183 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 IL9RQ01113 521 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 ATP6V0D2Q8N8Y2 350 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 RHBDD1Q8TEB9 315 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 ASNSD1Q9NWL6 643 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 SCML1Q9UN30 329 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 NCKAP1Q9Y2A7 1128 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 ACACAQ13085 2346 aa16.01■□□□□ 0.15
SEC13-210ENST00000428626 FLRT2O43155 660 aa16■□□□□ 0.15
SEC13-210ENST00000428626 HSF2BPO75031 334 aa16■□□□□ 0.15
SEC13-210ENST00000428626 GLI1P08151 1106 aa16■□□□□ 0.15
SEC13-210ENST00000428626 CDK17Q00537 523 aa16■□□□□ 0.15
SEC13-210ENST00000428626 SCAPQ12770 1279 aa16■□□□□ 0.15
SEC13-210ENST00000428626 AUHQ13825 339 aaKnown RBP16■□□□□ 0.15
SEC13-210ENST00000428626 TEAD4Q15561 434 aa16■□□□□ 0.15
SEC13-210ENST00000428626 MIIPQ5JXC2 388 aa16■□□□□ 0.15
SEC13-210ENST00000428626 ARTNQ5T4W7 220 aa16■□□□□ 0.15
SEC13-210ENST00000428626 OR6B2Q6IFH4 312 aa16■□□□□ 0.15
SEC13-210ENST00000428626 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
SEC13-210ENST00000428626 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
SEC13-210ENST00000428626 SARDHQ9UL12 918 aa16■□□□□ 0.15
SEC13-210ENST00000428626 CEP83Q9Y592 693 aa16■□□□□ 0.15
SEC13-210ENST00000428626 OR51B4Q9Y5P0 310 aa16■□□□□ 0.15
SEC13-210ENST00000428626 HS3ST4Q9Y661 456 aa16■□□□□ 0.15
SEC13-210ENST00000428626 A0A1B0GVM2 712 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 A0A1W2PR77 199 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 TCAF2A6NFQ2 919 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 RNASEH1O60930 286 aaKnown RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 DAB1O75553 588 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 MOCS3O95396 460 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 CCR1P32246 355 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 RDXP35241 583 aaKnown RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 MTIF2P46199 727 aaKnown RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 ADPRHP54922 357 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 PPP2CBP62714 309 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 RACK1P63244 317 aaKnown RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 PPP2CAP67775 309 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 KCNMA1Q12791 1236 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 NME3Q13232 169 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 SHBQ15464 509 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 HSP90AA4PQ58FG1 418 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 EFHC1Q5JVL4 640 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 C11orf57Q6ZUT1 292 aaPredicted RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 SLC26A9Q7LBE3 791 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 FAM71AQ8IYT1 594 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 MLKLQ8NB16 471 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 OR2T34Q8NGX1 318 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 FAM131CQ96AQ9 280 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 FAM81BQ96LP2 452 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 RPRD1AQ96P16 312 aaPredicted RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 OMDQ99983 421 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 PIGVQ9NUD9 493 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 VANGL2Q9ULK5 521 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 FZD4Q9ULV1 537 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 APOBEC2Q9Y235 224 aaKnown RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 SNX10Q9Y5X0 201 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 ITPR1Q14643 2758 aa15.99■□□□□ 0.15
SEC13-210ENST00000428626 ARID1BQ8NFD5 2236 aaPredicted RBP15.99■□□□□ 0.15
SEC13-210ENST00000428626 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 VILLO15195 856 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 PCDHGA12O60330 932 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 PAGE1O75459 146 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 CNTN5O94779 1100 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 ADCY5O95622 1261 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 IL1BP01584 269 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 GOT1P17174 413 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 ABCB4P21439 1286 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 SLC6A3Q01959 620 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 PTK2Q05397 1052 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 SLC12A1Q13621 1099 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 C5orf22Q49AR2 442 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms