RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TNFSF13BQ9Y275 285 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SEC22BO75396 215 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 ADH1AP07327 375 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 ZNF7P17097 686 aaPredicted RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 ANGPT1Q15389 498 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 CNSTQ6PJW8 725 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SLC26A11Q86WA9 606 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 PLD3Q8IV08 490 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 FBXO39Q8N4B4 442 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 CASP10Q92851 521 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 WNT8BQ93098 351 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 FOXP3Q9BZS1 431 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SERPINA4P29622 427 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 HDAC4P56524 1084 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 GCNT1Q02742 428 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 PABPC1LQ4VXU2 614 aaKnown RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 USP45Q70EL2 814 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 DSG4Q86SJ6 1040 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 LRRN4CLQ8ND94 238 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 ELMO1Q92556 727 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SEPHS2Q99611 448 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 AGXT2Q9BYV1 514 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 ASB8Q9H765 288 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 PARVBQ9HBI1 364 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 NDRG2Q9UN36 371 aaKnown RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 MORC2Q9Y6X9 1032 aaPredicted RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 GPR1P46091 355 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 MED21Q13503 144 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 ADCK1Q86TW2 530 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 PARGQ86W56 976 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 P3H2Q8IVL5 708 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 KLHL5Q96PQ7 755 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 POLR1EQ9GZS1 481 aaKnown RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 TMEM134Q9H6X4 195 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SEMA4BQ9NPR2 832 aaPredicted RBP9.91□□□□□ -0.82
SNX13-203ENST00000428135 IMPAD1Q9NX62 359 aa9.91□□□□□ -0.82
SNX13-203ENST00000428135 SLIT3O75094 1523 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 CFAP73A6NFT4 308 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 UBXN8O00124 270 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 EFCAB14O75071 495 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 PAEPP09466 180 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 CYP2A6P11509 494 aaPredicted RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 NOS2P35228 1153 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 GPR158Q5T848 1215 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 NLRP9Q7RTR0 991 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 MTDHQ86UE4 582 aaKnown RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 RIBC1Q8N443 379 aaPredicted RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 FIG4Q92562 907 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 TMEM120AQ9BXJ8 343 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ROGDIQ9GZN7 287 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ARL15Q9NXU5 204 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 SMAPO00193 183 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 EPHB6O15197 1021 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 TLR5O60602 858 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 TPBGLP0DKB5 382 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 AP5B1Q2VPB7 878 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 FAM153CQ494X1 144 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 SCIMPQ6UWF3 145 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 PWWP2AQ96N64 755 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 MRIQ9BWK5 157 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 POMKQ9H5K3 350 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 SEPT3Q9UH03 358 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ZNF229Q9UJW7 825 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 MKL2Q9ULH7 1088 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 KDELR1P24390 212 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ABRQ12979 859 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 PLEKHM3Q6ZWE6 761 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 LRP10Q7Z4F1 713 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 KRT84Q9NSB2 600 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 PADI3Q9ULW8 664 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 SNX13Q9Y5W8 968 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 A0A1W2PQH9 124 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ENO2P09104 434 aaPredicted RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 TRAF2Q12933 501 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
SNX13-203ENST00000428135 RMND5AQ9H871 391 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 BRD9Q9H8M2 597 aa9.9□□□□□ -0.82
SNX13-203ENST00000428135 KCPQ6ZWJ8 1503 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 A0A096LPK6 155 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 NCAM2O15394 837 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 GLUD1P00367 558 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 SPATA31C1P0DKV0 1188 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 CDH2P19022 906 aaPredicted RBP9.9□□□□□ -0.83
SNX13-203ENST00000428135 SERPINB4P48594 390 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 IRAK1P51617 712 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 MCL1Q07820 350 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 FAAP100Q0VG06 881 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 CRY1Q16526 586 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 PDPK2PQ6A1A2 396 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 RIPOR1Q6ZS17 1223 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 CEP68Q76N32 757 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms