RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TKTL2Q9H0I9 626 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 PCED1AQ9H1Q7 454 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 SLC32A1Q9H598 525 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 WDCPQ9H6R7 721 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 TMPRSS4Q9NRS4 437 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 ANO10Q9NW15 660 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 RRN3Q9NYV6 651 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 NOCTQ9UK39 431 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 MAP1BP46821 2468 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 A0A1W2PP55 124 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 BCAT2O15382 392 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-202ENST00000427943 FSBPO95073 299 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 VAV1P15498 845 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 SCNN1AP37088 669 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 PSMD8P48556 350 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 CXCR3P49682 368 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 MYL5Q02045 173 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 FOXC1Q12948 553 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 ARID5BQ14865 1188 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 SYCP1Q15431 976 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 BRMS1LQ5PSV4 323 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 PIP4P1Q86T03 277 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 STK40Q8N2I9 435 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 MSANTD4Q8NCY6 345 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 PTPRN2Q92932 1015 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 BIRC7Q96CA5 298 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 DNAAF2Q9NVR5 837 aaKnown RBP18.95■□□□□ 0.62
PSPC1-202ENST00000427943 FBXL12Q9NXK8 326 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 ARHGEF38Q9NXL2 777 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 NCKAP1Q9Y2A7 1128 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 SIK3Q9Y2K2 1263 aa18.95■□□□□ 0.62
PSPC1-202ENST00000427943 DOCK9Q9BZ29 2069 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SPAARA0A1B0GVQ0 90 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 TARSL2A2RTX5 802 aaKnown RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 FAM47DPA6NHR8 397 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 GJB3O75712 270 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 CNTN5O94779 1100 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 CD59P13987 128 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SOX5P35711 763 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 PLK1P53350 603 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 JAM2P57087 298 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 FMO1Q01740 532 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 BNC1Q01954 994 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 MTA1Q13330 715 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 ZNF177Q13360 481 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SLC25A52Q3SY17 297 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 CCDC183Q5T5S1 534 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SND1Q7KZF4 910 aaKnown RBP eCLIP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 C1orf216Q8TAB5 229 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 NT5C3BQ969T7 300 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 PGAP3Q96FM1 320 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 PCMTD1Q96MG8 357 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 CFAP57Q96MR6 1250 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SPAG5Q96R06 1193 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SGK2Q9HBY8 427 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 METTL5Q9NRN9 209 aaKnown RBP18.94■□□□□ 0.62
PSPC1-202ENST00000427943 SCML1Q9UN30 329 aa18.94■□□□□ 0.62
PSPC1-202ENST00000427943 A0A1B0GVT2 93 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 LGALS16A8MUM7 142 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 UPK3BL1B0FP48 263 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 UPK3BL2E5RIL1 263 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 RNASEH2AO75792 299 aaKnown RBP18.93■□□□□ 0.62
PSPC1-202ENST00000427943 TOP3BO95985 862 aaKnown RBP18.93■□□□□ 0.62
PSPC1-202ENST00000427943 CHRNB2P17787 502 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 SPINK2P20155 84 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 SLC8A1P32418 973 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 NNMTP40261 264 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 OXCT1P55809 520 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 CDR2Q01850 454 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 SULT2A1Q06520 285 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 ALFQ53S48 1182 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 LAYNQ6UX15 382 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 USP30Q70CQ3 517 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 PHLDB2Q86SQ0 1253 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 ZNF677Q86XU0 584 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 EMC1Q8N766 993 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 ALG14Q96F25 216 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 CAMK1GQ96NX5 476 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 FAM129BQ96TA1 746 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 OMDQ99983 421 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 ZDHHC5Q9C0B5 715 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 IL21RQ9HBE5 538 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 LIMA1Q9UHB6 759 aaKnown RBP18.93■□□□□ 0.62
PSPC1-202ENST00000427943 SLC25A13Q9UJS0 675 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 TMEM59LQ9UK28 342 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 VPS28Q9UK41 221 aa18.93■□□□□ 0.62
PSPC1-202ENST00000427943 CLDN11O75508 207 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 MBD3O95983 291 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 F9P00740 461 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 CYP1A1P04798 512 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-202ENST00000427943 ZNF18P17022 549 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 CSNK1EP49674 416 aaKnown RBP18.92■□□□□ 0.62
PSPC1-202ENST00000427943 CDH4P55283 916 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 FAM193AP78312 1265 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 SHC2P98077 582 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 C5orf22Q49AR2 442 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 KIAA0895LQ68EN5 471 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 ZNF683Q8IZ20 524 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms