RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CCDC185Q8N715 623 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 PIGKQ92643 395 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 RMDN1Q96DB5 314 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 ALG14Q96F25 216 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 BCLAF3A2AJT9 711 aaKnown RBP15.3■□□□□ 0.04
RTN4-210ENST00000427710 PATE3B3GLJ2 98 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 ASLP04424 464 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 RHOCP08134 193 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PLEKP08567 350 aaPredicted RBP15.3■□□□□ 0.04
RTN4-210ENST00000427710 VAV1P15498 845 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 ITPKAP23677 461 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PRKCIP41743 596 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PTPN9P43378 593 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 CDH4P55283 916 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 ST8SIA6P61647 398 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 ECT2LQ008S8 904 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 BYSLQ13895 437 aaKnown RBP15.3■□□□□ 0.04
RTN4-210ENST00000427710 E2F5Q15329 346 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 CSRP2Q16527 193 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PLA2G2CQ5R387 149 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 C11orf74Q86VG3 221 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 SLC41A1Q8IVJ1 513 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PRCCQ92733 491 aaPredicted RBP15.3■□□□□ 0.04
RTN4-210ENST00000427710 NUP58Q9BVL2 599 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 EDEM3Q9BZQ6 932 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 SUN2Q9UH99 717 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
RTN4-210ENST00000427710 TP53BP1Q12888 1972 aaPredicted RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 DRGXA6NNA5 263 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 SNAP91O60641 907 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 LRP3O75074 770 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 ZNF217O75362 1048 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 CLDN11O75508 207 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FTLP02792 175 aaPredicted RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 GYPCP04921 128 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 SRPRAP08240 638 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 ACADMP11310 421 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 ADRA1BP35368 520 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 ID4P47928 161 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 TPMTP51580 245 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 RPS14P62263 151 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 MTA1Q13330 715 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 TDRD12Q587J7 1177 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 FIGNQ5HY92 759 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 PPP1R15BQ5SWA1 713 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 DCUN1D2Q6PH85 259 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 STRADAQ7RTN6 431 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 GPR161Q8N6U8 529 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 CENPIQ92674 756 aaPredicted RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 TOE1Q96GM8 510 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 C1orf74Q96LT6 269 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 HAPLN3Q96S86 360 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 PSMB7Q99436 277 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 FEM1AQ9BSK4 669 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
RTN4-210ENST00000427710 TRIM7Q9C029 511 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 ITM2CQ9NQX7 267 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 TMEM74BQ9NUR3 256 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 USP36Q9P275 1121 aaKnown RBP15.29■□□□□ 0.04
RTN4-210ENST00000427710 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 OR51B4Q9Y5P0 310 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
RTN4-210ENST00000427710 IGLV3-10A0A075B6K4 115 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 A0A0D9SEW6 157 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.28■□□□□ 0.04
RTN4-210ENST00000427710 A0A1W2PQJ5 194 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 NDUFS2O75306 463 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 ZNF806P0C7X5 589 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 GLDCP23378 1020 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 CD6P30203 668 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 PLK1P53350 603 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 HNRNPA1L2Q32P51 320 aaKnown RBP15.28■□□□□ 0.04
RTN4-210ENST00000427710 AASDHQ4L235 1098 aaPredicted RBP15.28■□□□□ 0.04
RTN4-210ENST00000427710 C9orf64Q5T6V5 341 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 LYSMD4Q5XG99 296 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 HGSNATQ68CP4 663 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 SLC36A4Q6YBV0 504 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 PYROXD2Q8N2H3 581 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 STK40Q8N2I9 435 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
RTN4-210ENST00000427710 OR7D4Q8NG98 312 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 GPR174Q9BXC1 333 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 MUC3BQ9H195 1237 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 FSCN3Q9NQT6 498 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 WSB2Q9NYS7 404 aaPredicted RBP15.28■□□□□ 0.04
RTN4-210ENST00000427710 MYO1AQ9UBC5 1043 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 VPS28Q9UK41 221 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 CAPN11Q9UMQ6 739 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 CABIN1Q9Y6J0 2220 aa15.28■□□□□ 0.04
RTN4-210ENST00000427710 PLXNA2O75051 1894 aa15.27■□□□□ 0.04
RTN4-210ENST00000427710 AP5Z1O43299 807 aa15.27■□□□□ 0.04
RTN4-210ENST00000427710 MT-CO1P00395 513 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms