RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ACBD5Q5T8D3 534 aaPredicted RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 TRABD2AQ86V40 505 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 MPP5Q8N3R9 675 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 AGAP3Q96P47 875 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 ZYG11BQ9C0D3 744 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 HBS1LQ9Y450 684 aaKnown RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 RHOQP17081 205 aa27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 PPM1AP35813 382 aa27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 ADGRD1Q6QNK2 874 aa27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 SRRM1Q8IYB3 904 aaKnown RBP27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 MRRFQ96E11 262 aaKnown RBP27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 ZNF512Q96ME7 567 aaPredicted RBP27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 EPN3Q9H201 632 aa27.24■■□□□ 1.95
SH3GL3-202ENST00000427482 RASA4BC9J798 803 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 RASA4O43374 803 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 MAFKO60675 156 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 JCHAINP01591 159 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 MTA1Q13330 715 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 MYRFLQ96LU7 910 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 PRMT1Q99873 361 aaKnown RBP27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 DNMT3LQ9UJW3 386 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 MAD1L1Q9Y6D9 718 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 ZNF840PA6NDX5 716 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 SUN1O94901 812 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 AP2A1O95782 977 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 C1QAP02745 245 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 BRAFP15056 766 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 NFKB1P19838 968 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 ALDH1A3P47895 512 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 KBTBD12Q3ZCT8 623 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 RAP1GAP2Q684P5 730 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 NUGGCQ68CJ6 796 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 UNC5AQ6ZN44 842 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 C16orf59Q7L2K0 433 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 LRRC49Q8IUZ0 686 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 DCAKDQ8WVC6 231 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 ATXN2LQ8WWM7 1075 aaKnown RBP27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 AUTS2Q8WXX7 1259 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 TMEM248Q9NWD8 314 aa27.23■■□□□ 1.95
SH3GL3-202ENST00000427482 TMEM120BA0PK00 339 aa27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 ERI2A8K979 691 aaKnown RBP27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 TRDMT1O14717 391 aaKnown RBP27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 ATP5C1P36542 298 aaKnown RBP27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 MSH2P43246 934 aa27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 KCTD11Q693B1 232 aa27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 FBXL22Q6P050 247 aa27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 UMODL1-AS1Q8N2C9 162 aa27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 TRMT2BQ96GJ1 504 aaKnown RBP27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 NOL6Q9H6R4 1146 aaKnown RBP27.22■■□□□ 1.95
SH3GL3-202ENST00000427482 ARHGAP42A6NI28 874 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 PIAS1O75925 651 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 CCNB1P14635 433 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 KLHDC10Q6PID8 442 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 GPR65Q8IYL9 337 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 CNTD1Q8N815 330 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 STAMBPL1Q96FJ0 436 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 IL12RB2Q99665 862 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 MLPHQ9BV36 600 aaPredicted RBP27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 MRPL17Q9NRX2 175 aaKnown RBP27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 INTS9Q9NV88 658 aaKnown RBP27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 DONSONQ9NYP3 566 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 SENP1Q9P0U3 644 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 PCDHA11Q9Y5I1 949 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 PLXNA4Q9HCM2 1894 aa27.21■■□□□ 1.95
SH3GL3-202ENST00000427482 SDR42E2A6NKP2 422 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 DRGXA6NNA5 263 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 MATN3O15232 486 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 KRT15P19012 456 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 PRKCHP24723 683 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 DNAJB2P25686 324 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 PAPOLAP51003 745 aaKnown RBP27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 NDST2P52849 883 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 ALFQ53S48 1182 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 HECTD3Q5T447 861 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 TIGD7Q6NT04 549 aaPredicted RBP27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 PRPF39Q86UA1 669 aaKnown RBP27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 GSDMBQ8TAX9 411 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 BCAS4Q8TDM0 211 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 SLC44A1Q8WWI5 657 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 IGSF8Q969P0 613 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 PCDHB12Q9Y5F1 795 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 OBSL1O75147 1896 aa27.2■■□□□ 1.95
SH3GL3-202ENST00000427482 ZBBXA8MT70 800 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 CACNG3O60359 315 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 CNTN5O94779 1100 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 KCNQ1P51787 676 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 HTRA4P83105 476 aaPredicted RBP27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 SPARCL1Q14515 664 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 STEAP4Q687X5 459 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 NADSYN1Q6IA69 706 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 TFAP2DQ7Z6R9 452 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 KLHDC8BQ8IXV7 354 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 PPANQ9NQ55 473 aaKnown RBP27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 TRPM5Q9NZQ8 1165 aa27.2■■□□□ 1.94
SH3GL3-202ENST00000427482 GJB5O95377 273 aa27.19■■□□□ 1.94
SH3GL3-202ENST00000427482 MGAT1P26572 445 aa27.19■■□□□ 1.94
SH3GL3-202ENST00000427482 SESN2P58004 480 aaPredicted RBP27.19■■□□□ 1.94
SH3GL3-202ENST00000427482 VEPH1Q14D04 833 aa27.19■■□□□ 1.94
SH3GL3-202ENST00000427482 CHSY1Q86X52 802 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms