RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CEP192Q8TEP8 1941 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 A0A0D9SEW6 157 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 C2CD4BA6NLJ0 364 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 PLK4O00444 970 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 KHNYNO15037 678 aaKnown RBP13.12□□□□□ -0.31
GPC1-204ENST00000426280 SNAP91O60641 907 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 MT-CO1P00395 513 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 IGLV3-19P01714 112 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 GLDCP23378 1020 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 SNX16P57768 344 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 OGDHQ02218 1023 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 CDO1Q16878 200 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 HNRNPA1L2Q32P51 320 aaKnown RBP13.12□□□□□ -0.31
GPC1-204ENST00000426280 RNF219Q5W0B1 726 aaPredicted RBP13.12□□□□□ -0.31
GPC1-204ENST00000426280 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 MON1BQ7L1V2 547 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 CCDC185Q8N715 623 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 TTYH3Q9C0H2 523 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 C6orf106Q9H6K1 298 aaPredicted RBP13.12□□□□□ -0.31
GPC1-204ENST00000426280 ADAM22Q9P0K1 906 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 TBC1D30Q9Y2I9 924 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
GPC1-204ENST00000426280 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 METTL12A8MUP2 240 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 K7ERQ8 282 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 GIPC1O14908 333 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SRGAP2O75044 1071 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 NDUFS2O75306 463 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ASLP04424 464 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SKILP12757 684 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 LIMK1P53667 647 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 HDAC4P56524 1084 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 RPL7AP62424 266 aaKnown RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 BNC1Q01954 994 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 BRMS1LQ5PSV4 323 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SLC23A3Q6PIS1 610 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ARCQ7LC44 396 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ERMP1Q7Z2K6 904 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ZNF571Q7Z3V5 609 aaPredicted RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 MMAAQ8IVH4 418 aaKnown RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 C1orf216Q8TAB5 229 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 CPLX3Q8WVH0 158 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 CAPN10Q9HC96 672 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
GPC1-204ENST00000426280 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SUN2Q9UH99 717 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 SARDHQ9UL12 918 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 CEP250Q9BV73 2442 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ITIH6Q6UXX5 1313 aa13.11□□□□□ -0.31
GPC1-204ENST00000426280 ADAMTS9Q9P2N4 1935 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 IGLV3-10A0A075B6K4 115 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.1□□□□□ -0.31
GPC1-204ENST00000426280 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 E9PAM4 449 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 SMAD6O43541 496 aaKnown RBP13.1□□□□□ -0.31
GPC1-204ENST00000426280 F9P00740 461 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 CFIP05156 583 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
GPC1-204ENST00000426280 ENGP17813 658 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 RRM1P23921 792 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
GPC1-204ENST00000426280 ADRA1BP35368 520 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 MAPK8P45983 427 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 CDH4P55283 916 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 ZNF177Q13360 481 aaPredicted RBP13.1□□□□□ -0.31
GPC1-204ENST00000426280 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 RABGAP1LQ5R372 815 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 PYROXD2Q8N2H3 581 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 AADATQ8N5Z0 425 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 DNASE2BQ8WZ79 361 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 ORAI3Q9BRQ5 295 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 NEUROG2Q9H2A3 272 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 HAUS4Q9H6D7 363 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms