RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 MYL7Q01449 175 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TSPY1Q01534 308 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 CREB5Q02930 508 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 PSMD6Q15008 389 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TAF12Q16514 161 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 MGAT5BQ3V5L5 792 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TANGO2Q6ICL3 276 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 KRBA2Q6ZNG9 492 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 FGD2Q7Z6J4 655 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 ITIH5Q86UX2 942 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 CREG2Q8IUH2 290 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 WDR49Q8IV35 697 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 C12orf56Q8IXR9 622 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TMEM86AQ8N2M4 240 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 PDCL2Q8N4E4 241 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 GOLGA5Q8TBA6 731 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 SPPL2BQ8TCT7 592 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 C2orf15Q8WU43 125 aaKnown RBP6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 DIO2Q92813 273 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 HRASLS5Q96KN8 279 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 ZSWIM3Q96MP5 696 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 MMS19Q96T76 1030 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 SPOCK3Q9BQ16 436 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 KXD1Q9BQD3 176 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 PLA2G2FQ9BZM2 168 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 MTMR12Q9C0I1 747 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 ZFP14Q9HCL3 533 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 ASAH2Q9NR71 780 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 DDX43Q9NXZ2 648 aaKnown RBP6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TMEFF2Q9UIK5 374 aaPredicted RBP6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 SIX4Q9UIU6 781 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 GTF3C4Q9UKN8 822 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 L1RE1Q9UN81 338 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 TRAF6Q9Y4K3 522 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 YIPF1Q9Y548 306 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 CITO14578 2027 aa6.57□□□□□ -1.36
NIF3L1-207ENST00000426253 PTPRJQ12913 1337 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TCRBV16S1A1N1A0A5B0 115 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 GABRDO14764 452 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CALUO43852 315 aaPredicted RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 OPA1O60313 960 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 RHOBTB3O94955 611 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CRTAMO95727 393 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 FGF19O95750 216 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CAVIN2O95810 425 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 PDGFRBP09619 1106 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 HAPLN1P10915 354 aaPredicted RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 ACAT1P24752 427 aaKnown RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 LMO2P25791 158 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 FLT3P36888 993 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 GNL1P36915 607 aaPredicted RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 EPHA5P54756 1037 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TEKQ02763 1124 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CYP24A1Q07973 514 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TRPC3Q13507 836 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TEAD2Q15562 447 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 NFE2Q16621 373 aaPredicted RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 SOWAHAQ2M3V2 549 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 FAM78AQ5JUQ0 283 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 WDR5BQ86VZ2 330 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 OSTM1Q86WC4 334 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CCDC103Q8IW40 242 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 KIAA0895Q8NCT3 520 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.56□□□□□ -1.367e-12■■■■■ 48.9
NIF3L1-207ENST00000426253 SMARCD2Q92925 531 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 PSMG2Q969U7 264 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 ELSPBP1Q96BH3 223 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CCDC34Q96HJ3 373 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 PTCHD1Q96NR3 888 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 CGRRF1Q99675 332 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 SEPT5Q99719 369 aaPredicted RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 KCTD10Q9H3F6 313 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 GOLPH3LQ9H4A5 285 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 ATP13A1Q9HD20 1204 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TMLHEQ9NVH6 421 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 DMAC2Q9NW81 257 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TNPO3Q9Y5L0 923 aaKnown RBP6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 ABCA12Q86UK0 2595 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 SDK1Q7Z5N4 2213 aa6.56□□□□□ -1.36
NIF3L1-207ENST00000426253 TMEM82A0PJX8 343 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 MYBPHLA2RUH7 354 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 K7ESF4 209 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 MAN2B1O00754 1011 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 SLC28A2O43868 658 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ATP2C2O75185 946 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 C4BPAP04003 597 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 NR3C1P04150 777 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 FAM163BP0C2L3 166 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PSMC3P17980 439 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 WARSP23381 471 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 CYP2F1P24903 491 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 GABRR2P28476 465 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PCSK1P29120 753 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ATICP31939 592 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms