RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 COL25A1Q9BXS0 654 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 PABPC3Q9H361 631 aaKnown RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 HPS4Q9NQG7 708 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 RRN3Q9NYV6 651 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 PLAAQ9Y263 795 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 R3HDM2Q9Y2K5 976 aaKnown RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 TTC28Q96AY4 2481 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 GOLGA6L7A0A1B0GV03 622 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 GOLGA6CA6NDK9 693 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ARNTLO00327 626 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ENDOD1O94919 500 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 KRT10P13645 584 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 TCF4P15884 667 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 RING1Q06587 406 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 HERPUD2Q9BSE4 406 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 TBC1D14Q9P2M4 693 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ZNF148Q9UQR1 794 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 NEU2Q9Y3R4 380 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 HMGB1P1B2RPK0 211 aaPredicted RBP16.08■□□□□ 0.16
SHOX2-202ENST00000425436 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
SHOX2-202ENST00000425436 SLC9A3R1O14745 358 aaPredicted RBP16.08■□□□□ 0.16
SHOX2-202ENST00000425436 MYZAPP0CAP1 466 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 IL1R2P27930 398 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 VCPP55072 806 aaKnown RBP16.08■□□□□ 0.16
SHOX2-202ENST00000425436 ZXDAP98168 799 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 RUNX3Q13761 415 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 PDGFRLQ15198 375 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 TXNRD3NBQ6F5E7 133 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 CSGALNACT1Q8TDX6 532 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 CENPIQ92674 756 aaPredicted RBP16.08■□□□□ 0.16
SHOX2-202ENST00000425436 WDCPQ9H6R7 721 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 ANLNQ9NQW6 1124 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 SLC2A4RGQ9NR83 387 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 TMPRSS4Q9NRS4 437 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 HEBP1Q9NRV9 189 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 ANAPC5Q9UJX4 755 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 CA14Q9ULX7 337 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 ATP8A1Q9Y2Q0 1164 aa16.08■□□□□ 0.16
SHOX2-202ENST00000425436 COL4A3Q01955 1670 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 KCNU1A8MYU2 1149 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 F9P00740 461 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 KRT14P02533 472 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 NUDT17P0C025 328 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 CCR1P32246 355 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 SOX9P48436 509 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 CXCR3P49682 368 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 NUGGCQ68CJ6 796 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 RHBDF2Q6PJF5 856 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 BNIPLQ7Z465 357 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 PCGF5Q86SE9 256 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 FAM131BQ86XD5 332 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 TMEM25Q86YD3 366 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 UBALD2Q8IYN6 164 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 ALLCQ8N6M5 410 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 BHMTQ93088 406 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
SHOX2-202ENST00000425436 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 KLHL11Q9NVR0 708 aa16.07■□□□□ 0.16
SHOX2-202ENST00000425436 APOC4-APOC2K7ER74 178 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 SMAPO00193 183 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 DCXO43602 365 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 ACSL4O60488 711 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 TSPAN3O60637 253 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 CST8O60676 142 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 APOEP02649 317 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 APOC2P02655 101 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 IVDP26440 423 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 SLC11A2P49281 568 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 HDAC4P56524 1084 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 PFKPQ01813 784 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 IFFO1Q0D2I5 559 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 KRT81Q14533 505 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 DHCR24Q15392 516 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 OASLQ15646 514 aaKnown RBP16.06■□□□□ 0.16
SHOX2-202ENST00000425436 UAP1Q16222 522 aaPredicted RBP16.06■□□□□ 0.16
SHOX2-202ENST00000425436 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 SLC44A4Q53GD3 710 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 KCNT1Q5JUK3 1230 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 LY6G5CQ5SRR4 150 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 CEP85LQ5SZL2 805 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 DENND2CQ68D51 928 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 NADSYN1Q6IA69 706 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 SCYL2Q6P3W7 929 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 STRADAQ7RTN6 431 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 ANKS1BQ7Z6G8 1248 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms