RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 HMGB4Q8WW32 186 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 DHX58Q96C10 678 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 KREMEN1Q96MU8 473 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 B3GNT5Q9BYG0 378 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 TPSD1Q9BZJ3 242 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 TRIM9Q9C026 710 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 LRRC4CQ9HCJ2 640 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 DMAP1Q9NPF5 467 aaPredicted RBP5.62□□□□□ -1.51
VPS8-205ENST00000424721 CRTAC1Q9NQ79 661 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 AGPAT3Q9NRZ7 376 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 SMPD4Q9NXE4 827 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 IL37Q9NZH6 218 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 USP25Q9UHP3 1055 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 MYO15AQ9UKN7 3530 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 TICRRQ7Z2Z1 1910 aa5.62□□□□□ -1.51
VPS8-205ENST00000424721 A0A1W2PQD8 194 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 A0A1W2PQH9 124 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 TCRBV21S2A2A0A5A6 115 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 LNP1A1A4G5 178 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 PDXKO00764 312 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CDX4O14627 284 aaPredicted RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 CLIC2O15247 247 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 POLR2DO15514 142 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 CYP26A1O43174 497 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 HOXC11O43248 304 aaPredicted RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 COCHO43405 550 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 STX10O60499 249 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 DNAJC6O75061 913 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 TADA3O75528 432 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 MED26O95402 600 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 OLFM2O95897 454 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CYP17A1P05093 508 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CFIP05156 583 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 ACADMP11310 421 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 KRT13P13646 458 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 ENGP17813 658 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 KIR2DL1P43626 348 aaPredicted RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 ME1P48163 572 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CASP5P51878 434 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 PMS1P54277 932 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 MYL6P60660 151 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 ZNF33AQ06730 810 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 FXNQ16595 210 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 ZNF699Q32M78 642 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 C10orf76Q5T2E6 689 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 RALGAPA1Q6GYQ0 2036 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 KLHDC10Q6PID8 442 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 IL27RAQ6UWB1 636 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 UNQ6494/PRO21346Q6UXR6 183 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CHPFQ8IZ52 775 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 ZNF276Q8N554 614 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 NAT16Q8N8M0 369 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 MDGA1Q8NFP4 955 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 PARD3BQ8TEW8 1205 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 TMEM174Q8WUU8 243 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 HNRNPLLQ8WVV9 542 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 FAXDC2Q96IV6 333 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 USP28Q96RU2 1077 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 MRPL45Q9BRJ2 306 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 BBS2Q9BXC9 721 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 UBXN6Q9BZV1 441 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 MKRN2Q9H000 416 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 SMOC1Q9H4F8 434 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 CYP3A43Q9HB55 503 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 PCDH12Q9NPG4 1184 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 KLHL42Q9P2K6 505 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 SUCOQ9UBS9 1254 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 PILRBQ9UKJ0 227 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 SCML2Q9UQR0 700 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 APOBEC2Q9Y235 224 aaKnown RBP5.61□□□□□ -1.51
VPS8-205ENST00000424721 NFE2L3Q9Y4A8 694 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 NEUROG3Q9Y4Z2 214 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 PCDHA5Q9Y5H7 936 aa5.61□□□□□ -1.51
VPS8-205ENST00000424721 DMXL1Q9Y485 3027 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 FAM92AA1XBS5 289 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 SGK1O00141 431 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 MAPK13O15264 365 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 TGFB1I1O43294 461 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 TLR5O60602 858 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 TULP3O75386 442 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 C4BPAP04003 597 aaKnown RBP5.6□□□□□ -1.51
VPS8-205ENST00000424721 FAM200BP0CF97 657 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 NAT2P11245 290 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 HOXB2P14652 356 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 HNRNPLP14866 589 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS8-205ENST00000424721 FOSL1P15407 271 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 CD97P48960 835 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 SLC5A3P53794 718 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 MAP3K7CLP57077 242 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 ZNF445P59923 1031 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 SIM1P81133 766 aaPredicted RBP5.6□□□□□ -1.51
VPS8-205ENST00000424721 ENPEPQ07075 957 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 NCAPHQ15003 741 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 PLEKHG6Q3KR16 790 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 EMC10Q5UCC4 262 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 TCEAL6Q6IPX3 200 aa5.6□□□□□ -1.51
VPS8-205ENST00000424721 EPM2AIP1Q7L775 607 aaPredicted RBP5.6□□□□□ -1.51
VPS8-205ENST00000424721 ACOT1Q86TX2 421 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms