RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 COMMD10Q9Y6G5 202 aa7.59□□□□□ -1.19
BDNF-209ENST00000420794 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.59□□□□□ -1.19
BDNF-209ENST00000420794 PDE4DIPQ5VU43 2346 aa7.59□□□□□ -1.19
BDNF-209ENST00000420794 PABPN1LA6NDY0 278 aaKnown RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 A6NNZ2 444 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 HHLA1C9JL84 531 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 ATP9BO43861 1147 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 MFSD11O43934 449 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 PMPCBO75439 489 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 ENDOD1O94919 500 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 LUC7L3O95232 432 aaKnown RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 SEC24AO95486 1093 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 CCNB1P14635 433 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 H2AFXP16104 143 aaPredicted RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 RPL22P35268 128 aaKnown RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 NDST2P52849 883 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 STAT4Q14765 748 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 TCTN1Q2MV58 587 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 TUBB8Q3ZCM7 444 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 HP1BP3Q5SSJ5 553 aaPredicted RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 RARS2Q5T160 578 aaKnown RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 RASIP1Q5U651 963 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 CLP1Q92989 425 aaKnown RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 P2RY11Q96G91 374 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 C9orf72Q96LT7 481 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 MYCBPQ99417 103 aaPredicted RBP7.59□□□□□ -1.2
BDNF-209ENST00000420794 C10orf88Q9H8K7 445 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 ZDHHC7Q9NXF8 308 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 SCN1AP35498 2009 aa7.59□□□□□ -1.2
BDNF-209ENST00000420794 C2orf71A6NGG8 1288 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 RASA4BC9J798 803 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 TRDMT1O14717 391 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 TNFRSF10BO14763 440 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SCAMP3O14828 347 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 FANCGO15287 622 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 EIF3HO15372 352 aaKnown RBP eCLIP7.58□□□□□ -1.2
BDNF-209ENST00000420794 RASA4O43374 803 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 COCHO43405 550 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SERPINF2P08697 491 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 ZSCAN5DPP0CG00 497 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 TNFRSF8P28908 595 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 STX2P32856 288 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 MMP13P45452 471 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 ERVFC1P60507 584 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 RHOAP61586 193 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 PCSK7Q16549 785 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SLC9A4Q6AI14 798 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 RFWD3Q6PCD5 774 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 KLHDC10Q6PID8 442 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CFAP52Q8N1V2 620 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CCDC63Q8NA47 563 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 PPHLN1Q8NEY8 458 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 PPP1R14CQ8TAE6 165 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SLC35B2Q8TB61 432 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SLC22A17Q8WUG5 538 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 TTLL2Q9BWV7 592 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CCDC68Q9H2F9 335 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 LRRC40Q9H9A6 602 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 DTLQ9NZJ0 730 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 HS3ST4Q9Y661 456 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 GRM6O15303 877 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 RHOP08100 348 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 PFKLP17858 780 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CCNCP24863 283 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 KCNQ1P51787 676 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 TTC3P53804 2025 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 PDE1BQ01064 536 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 FBXL22Q6P050 247 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 KDELC2Q7Z4H8 507 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 GRASPQ7Z6J2 395 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 METTL3Q86U44 580 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 DEPDC1BQ8WUY9 529 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 QKIQ96PU8 341 aaKnown RBP eCLIP7.58□□□□□ -1.2
BDNF-209ENST00000420794 BBS2Q9BXC9 721 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 MAGEH1Q9H213 219 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SFXN1Q9H9B4 322 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 ETNK2Q9NVF9 386 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 SNX10Q9Y5X0 201 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CHADO15335 359 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 POLBP06746 335 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 ATF6P18850 670 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 PPARGP37231 505 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 SLCO1A2P46721 670 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CBX1P83916 185 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 KYNUQ16719 465 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 BEND6Q5SZJ8 279 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 TTC27Q6P3X3 843 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 RSPO2Q6UXX9 243 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 GET4Q7L5D6 327 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 SH3RF2Q8TEC5 729 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CAVIN3Q969G5 261 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 CYTH2Q99418 400 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 POLR1EQ9GZS1 481 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 PABPC3Q9H361 631 aaKnown RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 PPCSQ9HAB8 311 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 KIAA1522Q9P206 1035 aaPredicted RBP7.58□□□□□ -1.2
BDNF-209ENST00000420794 PLA2G4CQ9UP65 541 aa7.58□□□□□ -1.2
BDNF-209ENST00000420794 IQANK1A0A1B0GTG1 560 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms